Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02254 ATGGAACAAGATAACAACAATAACAATAACATCAACAACAATGTTTCTGATGCAAAAGATAGAAAGTTTGTCTATTTTTCACCAAAAAGAAGCATAGCTGAGAGAAGGGGTTTCAATAAAATCAACGCAGGGCTTATCAGTTTTGGTGCAACAACCCCTTTGGTTTCTCCAGCAACTCGATCACCATGTCTCACAATACCACCTGGGATTAGTCCCACCGCATTGCTTGAATCCCCCATCATGCTTCCTAATTCTCAGGCATCTGATGATGGAACACTTGAACAAATGTTTTTTCTTTTCAATGCCATGCCATCTCCCACCACCGGGAGTTTCACCATGCTTCCACCTCTCACCGATAAAGGATCAATGCTCACTTCAGTCAAACATGAACAAAAGAATGTGGATGTGCCTACCGCCTCCAATTTTTCCGCTTCTTTCAATTTTAAGCATCAAGCCAATTTAGATGCTGATTCTTTATCTCCATATTTTGCTTCTCTAAATCAGGTTTCTAATAATTGCCACATGATGAGTGGAGGACATAGAGACAGCCAAATGCTTGCTCAAGGTCAACAACTGTTAAATTTTTCATTCCCACAAGGTTTTTCAAGTGAATATTTAGCTAGAAATAGTGGAGTCCATTTCTACAATGATGTGAAAATGGTAGATGATGTGATTGTCAACACCAATAATGTTGACATACCAATATCTCGTTCCGAAGAAGCTAGCGGTGAAAGCACTCTGCCTGATAATTCTATCCACAGTGAGGATATCGGACAACATCATGTCTTAGAAGCAGAACAGAAAGAGATTTCTCATGCAGCAGGAGCAAAGACCTCAGAAGATGGTTATAATTGGAGAAAATATGGCCAAAAACAAGTAAAAGGTAGTGAATACCCGAGAAGCTACTACAAATGTACTCAGTCTAATTGTCAGGTCAAGAAAAAGGTGGAAAGATCACACGATGGCCACATAACAGAAATTATTTACAAGGGTAATCATAACCATGCAAAACCACATTCAAGTCGTCGAGGGTCAGTACCTTCTAGTGATGAGATGTCAGAAAATGCTGAAGCCAATGAAACATGTGATAGAGTTGATGCTGATTCCGTATGGGGAAACATTCAGTCGCGGGGAAAAGATGCAAAACACAATCCAGAACGGAAGCCTGATGGTCAAGAAAGGACATCCCCGCCTTCTGGTGCGACCGAGCTTTCAGATCCTATGAAGAGAGCTAGATCTCAAGGGTTTGAATCAGACGACGCTCCGGAGCATTCTTCTGCACTTGCTAATCATGATCGTGATAAAGATGGAGCCACTCAAGCAGTCTTATCACCTGAAAACAATTCTGAAGATGCCGACTCAGAATCGAAAAGAAGGAAGAAGGAGAGCTACCCGGTTGAAACAATGGTTCCTCCGAGGGCTGTTCGTGAGCCACGAGTGGTAGTCCAAATTGAGAGTGACATCGACATACTTGATGATGGTTATCGCTGGCGAAAGTATGGACAGAAGGTTGTCAAAGGGAATCCAAACCCAAGGAGCTACTACAAATGCACAAGTGCCGGATGTACCGTAAGGAAACATGTGGAAAGGGCTTCACACAATCTAAAGTATGTTCTTACAACTTATGAGGGAAAACATAACCACGAGGTTCCCGCTGCTAGAAATAACAATCATATAAGCTCAAGTGATGTTGGTTTATCTTCTACTTGTGCCAATGTCTTACCTGGGAGTGCCGTTATCCCGAAATCTGAAACTCATCAAACTCTTCCATCTCATTTCGATAGAAAACCTGATTTTAGCAATGACTTCCTGAGGTCAAGTTTGATGGGAAGTTTAAGTAATGATATGAAGTTTGGACCTTCCTCCATATCTCAAATGAATTACTCTTCCTTGAATAATATCATACCTTATGGCGCCTACGGAACGAGCCCTGACCATGTTGCTGTGCCTCAAACAGGACCTATAGCTTCAATGTTCCCTGAATTTCAAATGCCGCTACCGCTGAATCTTCCCTCATCTGGAAATTATTCTCTAGCTGGAATTAATTTTAACTATGCAAGACCTATGAGTTCTATCCAGTCTTATCTTTCAGGACAGCAGTTGAGGGATATGGATACAGGATTCTTAAGGCCTAAACAGGAGCTGAAGGAAGAATCTTCATATGCTGCATGTGCACCCTCTCTTGATCATGCAAGTACCTCACACACTCCACCATCACCATCACAATCCATCTATCAAAGTGCCATGCAAAATTTCCCTTCATAA 2265 0.4172 MEQDNNNNNNINNNVSDAKDRKFVYFSPKRSIAERRGFNKINAGLISFGATTPLVSPATRSPCLTIPPGISPTALLESPIMLPNSQASDDGTLEQMFFLFNAMPSPTTGSFTMLPPLTDKGSMLTSVKHEQKNVDVPTASNFSASFNFKHQANLDADSLSPYFASLNQVSNNCHMMSGGHRDSQMLAQGQQLLNFSFPQGFSSEYLARNSGVHFYNDVKMVDDVIVNTNNVDIPISRSEEASGESTLPDNSIHSEDIGQHHVLEAEQKEISHAAGAKTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQSNCQVKKKVERSHDGHITEIIYKGNHNHAKPHSSRRGSVPSSDEMSENAEANETCDRVDADSVWGNIQSRGKDAKHNPERKPDGQERTSPPSGATELSDPMKRARSQGFESDDAPEHSSALANHDRDKDGATQAVLSPENNSEDADSESKRRKKESYPVETMVPPRAVREPRVVVQIESDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHNLKYVLTTYEGKHNHEVPAARNNNHISSSDVGLSSTCANVLPGSAVIPKSETHQTLPSHFDRKPDFSNDFLRSSLMGSLSNDMKFGPSSISQMNYSSLNNIIPYGAYGTSPDHVAVPQTGPIASMFPEFQMPLPLNLPSSGNYSLAGINFNYARPMSSIQSYLSGQQLRDMDTGFLRPKQELKEESSYAACAPSLDHASTSHTPPSPSQSIYQSAMQNFPS 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02254 754 FunFam WRKY transcription factor 57 477 551 - -
Mepo3g02254 754 MobiDBLite consensus disorder prediction 379 393 - -
Mepo3g02254 754 Gene3D WRKY domain 265 339 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g02254 754 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 184 572 IPR044810 GO:0003700
Mepo3g02254 754 Coils Coil 1 21 - -
Mepo3g02254 754 Pfam WRKY DNA -binding domain 492 549 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g02254 754 Pfam WRKY DNA -binding domain 280 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g02254 754 Gene3D WRKY domain 478 544 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g02254 754 SMART WRKY_cls 491 550 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g02254 754 SMART WRKY_cls 279 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g02254 754 MobiDBLite consensus disorder prediction 341 355 - -
Mepo3g02254 754 SUPERFAMILY WRKY DNA-binding domain 276 338 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g02254 754 MobiDBLite consensus disorder prediction 726 754 - -
Mepo3g02254 754 MobiDBLite consensus disorder prediction 328 467 - -
Mepo3g02254 754 ProSiteProfiles WRKY domain profile. 486 551 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g02254 754 MobiDBLite consensus disorder prediction 410 439 - -
Mepo3g02254 754 SUPERFAMILY WRKY DNA-binding domain 484 551 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g02254 754 MobiDBLite consensus disorder prediction 450 466 - -
Mepo3g02254 754 FunFam WRKY transcription factor 266 339 - -
Mepo3g02254 754 ProSiteProfiles WRKY domain profile. 274 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02254 Mepo-Chr3 32265495 32269678 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02254 1 554 WRKY Transcription Factor Family AT5G56270 39.616 9.31e-99 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo3g02254 WRKY 1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02254 K18835 - gmx:100800211 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02254 3 32265495 32269678 Mepo3g02254 3 32265495 32269678 ECH