Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02252 ATGGAGCAGAACAACAACAACAACATCAACAACGATAACAATGAAAACAAAAATGGGGGTGGTGAAATCAACAATGTTTCTTATTCAAAAGAAGGAAACTTTTTTGATTTTTCACCAAAAAGAAGCATAGCTGAGAGAAGGGGTTTCAATAAAATCAACACAGGACTTGTTCGTTTTGGTGCAACAACGCCTTTGGTTTCTCCAGCAACTCGATCACCATGGCTCACAATACCACCTGGGATTAGTCCCACTGCATTGCTTGAATCCCCCGTCATGCTTCCTAATGCTCAGGTCATGCCATCTCCCACCACCGGGAGTTTCACCATGCTTCCACCTCTCACTGATGAAGGATCAATGATCACTTCAATCAAACATAAACAAGTGGATGTGCCTACTGCCTCTGATTTTACCGCCTCTTTCAATTTCAAGAATCAAGACAATTTTGATGTTGATTCTTTATCTCCCTATTTTGCTTCTCTAAACCAGGTTTCTAGTAATCACCACATGATGAATGGAGGACATGGAGACAGCCAAATGCTTGTTCAAGATCAACAACTGTTAGATTTTTCATTCCCAGAAGATTTTTCAAATGACTATTTAGCTAGCGATGAAAGCATTCTGCTTGAAAATTCAATTCACAGCGAGGATATCGGACAACATCATGTCCTAGAAGCAGAACAGAAAGAGATGTCTCATGCAGCAGGAGCAAAGACCTTACAGGATGGTTATAATTGGAGGAAATATGGCCAAAAACAAGTAAAAGGTAGTGAATATCCAAGAAGCTACTACAAATGTAATCAGTCTAATTGTCAGGTCAGGAAAAAGGTGGAAAGATCACATGATGGCCACATAAGAGAAATTATTTACAAGGGTAATCATAACCATGCAAAACCACGTTCAAGCCGTCGAGGATCAGTACCTTCTAGTGATGAAATGTCAGAAAATGCTGAAGCCAATGAAACATGGGGAAACATTCAGTCACGAGGAAAAGATGCAAAGCACAATCCGGAATGGAAGCCTGATGGTCAAGAAAGAACATCCCGACCTTCTGATGTGGCCGAGCTTTCGGATCCTATGAAGAGACCTAGATCTCAAGGTATGTTTGAATCAGTCGACGCTCCGGAGCATTCTTCCGCACTTGCTAATCATGATGGTGATAAAGATGGAGCCACTCAAGCAGTCTTATCACCTGAAAGCAATTCCGAAGATTCCGACTCAGAATCGAAAAGAAGGAAGAAGGAGAGCTACCCGGTTGAAACAATGATGCCTCGGAGGGCTGTTCGTGCGCCACGAGTGATAGTCCAAAGTGAGAGTGACATCGATGTACTTGATGATGGTTATCGCTGGCGAAAGTATGGACAGAAGGTTGTCAAAGGGAATCCAAATCCAAGGAGCTACTACAAATGCACAAGTGCTGGATGTACCGTAAGGAAACATGTGGAAAGGGCTTCACACAATCTTAAGTATGTTCTTACAACTTATGAGGGAAAACATAACCATGAAGTTCCTGCTGCTAGAAATAACAATCATGCAAGCTCAAGTGCTAATGTGTTACACAGGAGAGCCGTTATCCCAAGTTCTGAAACTCGTCGAACTCTTCCATCTCATTTTGTTAGTAAACCTGATTTTACCAATGATTTCCTAGGGTCAAGTTTGATGGGAAGTTTCAGTAATGATATGAAGTTTGGAGCTAACTCCTCATCTCAAATGAATTACTCTTCTTTGAATAACATCATACCTTATGGCGCCTACGGAGCGATCCCTGACCATGTTGCTGTTCCTCAAACAGGACCTATTGCTTCAATGTTTCCTGAATTTCAAATGCCACCACCGCTGAATCTTCCCTCGTCTGGAAATTATTCTCTAGCTGGAAGTAATTTTAACTATGAGAAACCTATGAGTTCTATCCAGTCTTACCTTTCAGGGAAGCAGTTGAGGGATATGGATACAGGATTCTTAAAGGGCAAACAGGCGCTGAATGAAGAATCTTCATATGCTGCATGTGCACCCTCTCTTGATCATGCAAGTACCTCACACACTGCACCAGAATTTTCATATGCTGCATGTGCACCCTCTCTTGATCAAGCAAGTACCTCACACACTCCACCATCACCATCACAAGCCATTTATCAAAGTGTCATGCAAAATTTCCCTTCATAA 2160 0.419 MEQNNNNNINNDNNENKNGGGEINNVSYSKEGNFFDFSPKRSIAERRGFNKINTGLVRFGATTPLVSPATRSPWLTIPPGISPTALLESPVMLPNAQVMPSPTTGSFTMLPPLTDEGSMITSIKHKQVDVPTASDFTASFNFKNQDNFDVDSLSPYFASLNQVSSNHHMMNGGHGDSQMLVQDQQLLDFSFPEDFSNDYLASDESILLENSIHSEDIGQHHVLEAEQKEMSHAAGAKTLQDGYNWRKYGQKQVKGSEYPRSYYKCNQSNCQVRKKVERSHDGHIREIIYKGNHNHAKPRSSRRGSVPSSDEMSENAEANETWGNIQSRGKDAKHNPEWKPDGQERTSRPSDVAELSDPMKRPRSQGMFESVDAPEHSSALANHDGDKDGATQAVLSPESNSEDSDSESKRRKKESYPVETMMPRRAVRAPRVIVQSESDIDVLDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHNLKYVLTTYEGKHNHEVPAARNNNHASSSANVLHRRAVIPSSETRRTLPSHFVSKPDFTNDFLGSSLMGSFSNDMKFGANSSSQMNYSSLNNIIPYGAYGAIPDHVAVPQTGPIASMFPEFQMPPPLNLPSSGNYSLAGSNFNYEKPMSSIQSYLSGKQLRDMDTGFLKGKQALNEESSYAACAPSLDHASTSHTAPEFSYAACAPSLDQASTSHTPPSPSQAIYQSVMQNFPS 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02252 719 MobiDBLite consensus disorder prediction 330 358 - -
Mepo3g02252 719 FunFam WRKY transcription factor 57 429 503 - -
Mepo3g02252 719 Pfam WRKY DNA -binding domain 444 501 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g02252 719 Pfam WRKY DNA -binding domain 240 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g02252 719 MobiDBLite consensus disorder prediction 301 328 - -
Mepo3g02252 719 ProSiteProfiles WRKY domain profile. 234 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g02252 719 ProSiteProfiles WRKY domain profile. 438 503 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g02252 719 SUPERFAMILY WRKY DNA-binding domain 236 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g02252 719 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 87 521 IPR044810 GO:0003700
Mepo3g02252 719 SMART WRKY_cls 239 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g02252 719 SMART WRKY_cls 443 502 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g02252 719 FunFam WRKY transcription factor 226 299 - -
Mepo3g02252 719 MobiDBLite consensus disorder prediction 288 418 - -
Mepo3g02252 719 Gene3D WRKY domain 225 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g02252 719 Gene3D WRKY domain 428 504 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g02252 719 MobiDBLite consensus disorder prediction 402 418 - -
Mepo3g02252 719 MobiDBLite consensus disorder prediction 1 25 - -
Mepo3g02252 719 SUPERFAMILY WRKY DNA-binding domain 437 503 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02252 Mepo-Chr3 32242156 32247205 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02252 29 506 WRKY Transcription Factor Family AT5G56270 42.490 4.55e-100 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo3g02252 WRKY 9.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02252 K18835 - gmx:100800211 716.072