Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02250 ATGGGGATCATAGTTGAAGTTGAAAACATTGATGAAGACGACGACGTTTTGATTCCTCCACCTAATTTCTCCATGGTTGAAGATTGCATTTATCGATCTAGTCTTCCTAAACCTTCCAGTTTTCCCTTTCTTCAAACCCTCAACCTTCGCTCTATCATATACTTGTGTCCTGAACCCTACCCTGAAGAGAATTTGGACTTCTTAAAGGAACAGAATATTCGTCTTTTTCAATTTGGAATCGAGGGCAAAACGGAAGTTTCCTTACCTGCTCTGAGGGATTCTATTATGGAGGCTTTGAAAGTTTTAGTTGATGTGAGAAATCACCCTATTTTGGTTCATTGCAGACAAGGAAAGCATAGGACAGGGTGCCTTGTTGGCTGCTTCAGAAAGTTGCAGAATTGGTGTTTGTCTTCCGCGTTTGAGGAGTATCAGCGATTTGCTGGTGTTAAATCCAGGGCAGCGGATTTAACATTTATAGAGAGGTTTGACCTCGTAAGTCTTAGGCAGTGTCTTTACAGCATCATCTACCAGTACCAAGGTGCTTCAAAGAAGCGCAGGTTGATGTACCAAGATGAGAATTTACAGAAACCCCGGCTGACATCATTTTAG 609 0.4187 MGIIVEVENIDEDDDVLIPPPNFSMVEDCIYRSSLPKPSSFPFLQTLNLRSIIYLCPEPYPEENLDFLKEQNIRLFQFGIEGKTEVSLPALRDSIMEALKVLVDVRNHPILVHCRQGKHRTGCLVGCFRKLQNWCLSSAFEEYQRFAGVKSRAADLTFIERFDLVSLRQCLYSIIYQYQGASKKRRLMYQDENLQKPRLTSF 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02250 202 ProSitePatterns Tyrosine specific protein phosphatases active site. 112 122 IPR016130 GO:0016311|GO:0016791
Mepo3g02250 202 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 93 125 IPR000387 GO:0016311|GO:0016791
Mepo3g02250 202 FunFam probable tyrosine-protein phosphatase At1g05000 16 166 - -
Mepo3g02250 202 Gene3D Protein tyrosine phosphatase superfamily 16 166 IPR029021 -
Mepo3g02250 202 PANTHER TYROSINE-PROTEIN PHOSPHATASE 14 176 - -
Mepo3g02250 202 ProSiteProfiles Dual specificity protein phosphatase domain profile. 22 177 IPR020422 GO:0006470|GO:0008138
Mepo3g02250 202 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 17 162 IPR029021 -
Mepo3g02250 202 Pfam Tyrosine phosphatase family 17 164 IPR004861 -
Mepo3g02250 202 PRINTS Plant and fungal dual specificity phosphatase signature 90 104 IPR020428 GO:0016791
Mepo3g02250 202 PRINTS Plant and fungal dual specificity phosphatase signature 17 34 IPR020428 GO:0016791
Mepo3g02250 202 PRINTS Plant and fungal dual specificity phosphatase signature 54 67 IPR020428 GO:0016791
Mepo3g02250 202 PRINTS Plant and fungal dual specificity phosphatase signature 73 87 IPR020428 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02250 Mepo-Chr3 32230292 32232200 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02250 1 198 Protein tyrosine phosphatase (PTP) family AT3G02800 65.829 1.42e-97 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02250 K18045 - gmx:100785746 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02250 3 32230292 32232200 Mepo3g02250 3 32230292 32232200 ECH