Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02239 ATGGTTTCCCTTTCAATTCCTTTCTTCCCTCTCACTCCACAAAAATCAACTTCCCCTTCTACTAAATTTCAACCCAAAAACAACTACGTAAATCCATTCCATCACAGCAATAAACATCACAGAAAAGTTATCTGTGCTTGCATCGCTCCTCCACAAAATTTCAAAGCCCAGGACTCTTCCTCCATTCAATTCAATGGTTCATCCAAATCAGAACAATTAAGCACTGCGCGGGATCATGAAGATGATTCTGATGTTCTGATTGAGTGTAGAGATGTTTATAAGTCTTTTGGGGAAAAGAAAATCTTAAATGGTGTCAGCTTCAAGATCAGACATGGTGAAGCTGTTGGAATAATTGGTCCCTCCGGGACCGGCAAATCTACAATTTTGAAGATTATTGCAGGACTTCTTGCTCCGGACAAGGGAGAAGTTTATATTCGAGGTAGAAAGAGAGATGGTTTGATAAGTGATGACGAGATATCTGGTCTTCGGATTGGATTAGTGTTCCAAAGTGCGGCACTTTTTGATTCTTTGACTGTTCGTGAAAATGTTGGTTTTCTCTTGTATGAACACTCAAGCATGCCTGAGGAACAGATATCGGAGCTTGTCAAGGAAACCTTGGCTGCAGTTGGTTTGAAGGGAGTTGAGAATCGGCTTCCTTCTGAGTTATCAGGAGGAATGAAAAAGCGAGTTGCCCTAGCTCGATCTATTATTTTTGACACCACAAAGGATTCAATAGAACCAGAGGTGCTCTTGTATGACGAACCAACTGCTGGACTTGATCCCATTGCATCTACCGTTGTTGAGGATCTGATTCGCTCTGTGCATATAAAAGGGCGAGATGCACTTGGAAAACCTGGGAATATTTCATCTTATGTGGTCGTTACTCACCAACATAGTACCATTAAAAGAGCCATTGATAGGTTGTTGTTTTTACACAAGGGTAAGCTTGTTTGGGAAGGAATGACTCATGAATTTACAACTTCAACGAATCCGATTGTTCAGCAGTTTGCATCCGGAAGCCTAGATGGTCCTATCAAATATTAG 1044 0.4119 MVSLSIPFFPLTPQKSTSPSTKFQPKNNYVNPFHHSNKHHRKVICACIAPPQNFKAQDSSSIQFNGSSKSEQLSTARDHEDDSDVLIECRDVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRDGLISDDEISGLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMPEEQISELVKETLAAVGLKGVENRLPSELSGGMKKRVALARSIIFDTTKDSIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGRDALGKPGNISSYVVVTHQHSTIKRAIDRLLFLHKGKLVWEGMTHEFTTSTNPIVQQFASGSLDGPIKY 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02239 347 SMART AAA_5 111 315 IPR003593 GO:0016887
Mepo3g02239 347 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 328 IPR027417 -
Mepo3g02239 347 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 87 338 IPR003439 GO:0005524
Mepo3g02239 347 Pfam ABC transporter 102 257 IPR003439 GO:0005524
Mepo3g02239 347 Gene3D - 73 339 IPR027417 -
Mepo3g02239 347 CDD ABC_Org_Solvent_Resistant 87 336 - -
Mepo3g02239 347 ProSitePatterns ABC transporters family signature. 222 236 IPR017871 GO:0005524|GO:0016887
Mepo3g02239 347 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 24 347 - -
Mepo3g02239 347 MobiDBLite consensus disorder prediction 58 72 - -
Mepo3g02239 347 MobiDBLite consensus disorder prediction 58 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02239 Mepo-Chr3 32093889 32100347 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02239 86 316 Calmodulin-binding Proteins AT2G36910 28.916 1.28e-16 79.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02239 3 32093889 32100347 Mepo3g02239 3 32093889 32100347 ECH