Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02226 ATGGCATCCAAATCCTTCAGCATCTCTGCCACTTCACAAGATGAAGGTGATTCTTCCCACACAAAAGAAAGGGTGAACATGAAGGCGAATGAAGATCAACTCTCAAAATCAAATTCCAGCAAGTCTGTCGGTTCAGTAAAGCTATCGAAAGATGATGTTGTTAGCCCTATTGAAGTTGGTTCAACATCTTCTTTTGCTAATAACAGGAATGAAGGGAAAGATGAGAAGAAGAATGAAGAGAAAAAGTATTTTACATGCTCGTATTGCAAGGGGCAATTTTCTACTTTCCAAGGCTTAGGAGGGCATCAAAATGCCCATAAAGCAGAACGTGCATTGGAAAAACAACGTGGTGCAAGGTATGGTGGTGGTGCTTTAGGTTTAGGGCAATCTCACTTTAAACCTTATTTCAATTATTCTAGTACTCTTTTTACACCTTATAATAATTACAGGGGCCTTGGTGTTACAATGGAGTCAACAATTCAAAAACCACCTTATACTAACCCTGGGTTTACCCCAAATGGTTCTGGATATGGTTATGGTAGTTTGAGTTTGAATGAGATGTTACACCCTTCACTTTTTAACTTGAGAAATAATATAGAGGGTAGTAATACTGGAGTTGGAACTCTAGGTTTTGTTGGAGCAAGTACTTCAAGATTACACCCTTCACTTTTTAACTTGAGAAATAATATTGAGGGTAGTAATACTAGAGTTGGAACTCTAGGTATTGGTGGAGCAAGTACTTCCAGAATTGAAGATGGTACAAATAATAAAATTGGTGCTATTCTAAAACTTGGAGATTCTTCTACTGCTACAAGTTCAAGCTCAAACACAGACAAGAAAAATGTTGTGGCTACTACTTCTGCAATGGATGATGATACTGATCATGATTCAAAGTCAAACATTGAAGAAGAACCCTCCAATTTTGACTCTTCTGGACTGGACTTAACACTCAGGCTTTAG 960 0.3792 MASKSFSISATSQDEGDSSHTKERVNMKANEDQLSKSNSSKSVGSVKLSKDDVVSPIEVGSTSSFANNRNEGKDEKKNEEKKYFTCSYCKGQFSTFQGLGGHQNAHKAERALEKQRGARYGGGALGLGQSHFKPYFNYSSTLFTPYNNYRGLGVTMESTIQKPPYTNPGFTPNGSGYGYGSLSLNEMLHPSLFNLRNNIEGSNTGVGTLGFVGASTSRLHPSLFNLRNNIEGSNTRVGTLGIGGASTSRIEDGTNNKIGAILKLGDSSTATSSSSNTDKKNVVATTSAMDDDTDHDSKSNIEEEPSNFDSSGLDLTLRL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02226 319 MobiDBLite consensus disorder prediction 266 319 - -
Mepo3g02226 319 MobiDBLite consensus disorder prediction 31 46 - -
Mepo3g02226 319 MobiDBLite consensus disorder prediction 1 15 - -
Mepo3g02226 319 MobiDBLite consensus disorder prediction 1 49 - -
Mepo3g02226 319 SUPERFAMILY beta-beta-alpha zinc fingers 80 112 IPR036236 -
Mepo3g02226 319 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Mepo3g02226 319 MobiDBLite consensus disorder prediction 289 303 - -
Mepo3g02226 319 MobiDBLite consensus disorder prediction 266 288 - -
Mepo3g02226 319 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 111 IPR013087 -
Mepo3g02226 319 Gene3D Classic Zinc Finger 62 121 - -
Mepo3g02226 319 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 3 319 IPR044246 GO:0009788
Mepo3g02226 319 MobiDBLite consensus disorder prediction 16 30 - -
Mepo3g02226 319 Pfam C2H2-type zinc finger 83 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02226 Mepo-Chr3 31972212 31973171 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02226 80 187 C2H2 Transcription Factor Family AT5G25160 37.963 2.59e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02226 - - mtr:11437800 405.986