Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02224 ATGGAACTTCACAACCACATTCTTCACTTTACAGTTCTGTTCCTATGTATGTTTCCTCAGTCATTCAACTGCCAACAAGTATACCTCAGTAACACTGTCTTTGACTGCACTAACACCTCTTCTGTACCAAAAGGATACCTCTGCAATGGCCTTAAAAAATCATGTACTTCCTTTTTAGTTTTCAAGTCAAAACCTCTCTATGATAATCCTACAAAAATTGCCAACCTTCTTCGCTCTGAAGCATCGGCCATAGCCTCAATCAATAAGATCCCTATAAATGAGAAGATTCCTTCAAATAAATCAATCATTGTCCCGGTCTTCTGTTCATGTGATGGAAATATCTACCAGCATAGTACATCTTACTCTGTAAAGCAGAATGATACTTACTATGAGTTGGTAAAAGAAACTTACCAAGGCCTTACAACCTGCCAGGCATTGATGGGTCAGAACTACTATGCTCCTGTCTTAATTCCACTTGATGCTGAGCTTACAGTTCCAATACTATGTGCTTGTCCTACAGTAAACCTGACGGCAAAAGGGGTTACCTCCTTACTAGTTCACATGGTGAACTATGGTGAAACGGTTAAGTCGATAGGAGAAGCTTATGGTGTTGATGAACATAGTATGCGAGAGGCCAATGAGTTGTCAGGGCTGCAAAGTGCAAACAGCAGTGTGATCCTCTTTGCATCGACGCCTATACTAGTTCCTCTGAGACGCAAGAATTGTAAAGAGAACTCAGATAGATTCTATTGCAAATGTTCTGAGGAACAGCATGGAGATGAAAGCTCCAAGGGGATCTACTGTGACGAATCTCCTAGACGAAAAGTTCCTGCAAAATTGGTTGCTGCCTCAGGTATGGGAATTGGTACAGTCTTCCTGTGTTTGTTTCTTTTGAGTTACAAATTATATCAACACATAAAGAAAAGGAGAGCGAGTACTCATAAGGAAAAGTTATTCAGGCAAAACGGTGGTTACTTGTTACAAGAGAAGTTATCGTCTTATGGAAATGGAGAAATGGCAAAGCTTTTTACGGCAGAAGAGCTGCAAAGAGCAACAGATAACTACAACCGGAGTAGATTTCTTGGTCAAGGTGGCTATGGCACGGTGTACAAAGGAATGTTACCAGATGGAACCATAGTTGCAGTTAAAAAGTCAAAAGAACTGGAAAGGAACCAGATAGAGACTTTTGTCAATGAAGTGGTCATCTTGTCACAGATCAACCACAGGAATATTGTCAAACTCTTAGGCTGTTGTCTTGAAACAGAAACTCCATTACTAGTTTATGAATTTATTCCCAATGGAACACTTTCCCAACATATACATAAGAAAGACCAAGAGTCCTTCCTTTCATGGGAAGACCGCCTGAGAATTGCATGTGAAGTTGCTGGAGCAGTGGCATATATGCATTTTTCGGCTTCCATTCCAATCTTTCACAGAGACATAAAACCCACAAACATACTACTAGACAGTAACTTTAGTGCTAAAGTATCTGATTTTGGGACATCAAGATCAATACCACTAGATAAGACTCACCTAACCACATTTGTTGGTGGAACATACGGGTACATAGACCCTGAATATTTCCAGTCCAGTCAATTCACTAATAAGAGTGATGTATACAGTTTTGGGGTCGTGCTTGTAGAGCTCATAACCGGTAGAAAGCCTATTTCATTCTATGATGAAGATGACGGTCAGAATTTGATTGCACATTTCATTTCAGTGGTGAAGGAGAACCAAGTTTCTCAAATTATAGATGCCAGACTGCAAAAGGAAGCAGGGCAAGACACCATTCTTGCCATTTCAAGTCTTGCAAGGAGATGCTTGAGACTTAATCATAAGAAAAGACCAACAATGAAAGAGGTTTCAGCAGAATTAGAAACACTGAGAAGGGCACAAAGTTGTTTTGAAATCAACCATGATCATGATTCTTCAACAAGTGATGAAGAATCATTTGGGCACGTAATTAATGAAACAACAGACCAAGAATCCAGAGATGAAAGCACTTTATTTTCCTTACAAATAGAATCCACGTCCTTCTGA 2040 0.398 MELHNHILHFTVLFLCMFPQSFNCQQVYLSNTVFDCTNTSSVPKGYLCNGLKKSCTSFLVFKSKPLYDNPTKIANLLRSEASAIASINKIPINEKIPSNKSIIVPVFCSCDGNIYQHSTSYSVKQNDTYYELVKETYQGLTTCQALMGQNYYAPVLIPLDAELTVPILCACPTVNLTAKGVTSLLVHMVNYGETVKSIGEAYGVDEHSMREANELSGLQSANSSVILFASTPILVPLRRKNCKENSDRFYCKCSEEQHGDESSKGIYCDESPRRKVPAKLVAASGMGIGTVFLCLFLLSYKLYQHIKKRRASTHKEKLFRQNGGYLLQEKLSSYGNGEMAKLFTAEELQRATDNYNRSRFLGQGGYGTVYKGMLPDGTIVAVKKSKELERNQIETFVNEVVILSQINHRNIVKLLGCCLETETPLLVYEFIPNGTLSQHIHKKDQESFLSWEDRLRIACEVAGAVAYMHFSASIPIFHRDIKPTNILLDSNFSAKVSDFGTSRSIPLDKTHLTTFVGGTYGYIDPEYFQSSQFTNKSDVYSFGVVLVELITGRKPISFYDEDDGQNLIAHFISVVKENQVSQIIDARLQKEAGQDTILAISSLARRCLRLNHKKRPTMKEVSAELETLRRAQSCFEINHDHDSSTSDEESFGHVINETTDQESRDESTLFSLQIESTSF 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02224 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Mepo3g02224 679 Gene3D Phosphorylase Kinase; domain 1 328 430 - -
Mepo3g02224 679 ProSiteProfiles Protein kinase domain profile. 355 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02224 679 Pfam LysM domain 187 219 IPR018392 -
Mepo3g02224 679 Pfam Protein kinase domain 355 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02224 679 SUPERFAMILY Protein kinase-like (PK-like) 338 625 IPR011009 -
Mepo3g02224 679 FunFam Wall-associated receptor kinase 2 431 649 - -
Mepo3g02224 679 Gene3D Transferase(Phosphotransferase) domain 1 431 651 - -
Mepo3g02224 679 CDD STKc_IRAK 361 628 - -
Mepo3g02224 679 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 141 636 IPR045274 GO:0007166
Mepo3g02224 679 FunFam Wall-associated receptor kinase 2 326 430 - -
Mepo3g02224 679 SMART serkin_6 355 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02224 679 ProSitePatterns Protein kinases ATP-binding region signature. 361 384 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02224 Mepo-Chr3 31947203 31950630 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02224 242 629 Receptor kinase-like Gene Family AT1G16130 53.708 6.98e-141 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mepo3g02224 Pkinase 1.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02224 - - gmx:100795455 989.178