Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02210 ATGGAAAGCCAAGACCCACCAAATCCACCACCACCATTAATGAATATGCCATCACCACAAGCTCAAAACAATAACACTTCTCTCCCCTTCTTCTTTACGCCTTCTTTACAAAACTACCCTTTGGAATCTCAAGATCAAGGTCTTGGTGATATTGAGTGGGGTAACTTTTTCTTAGGTCAAAACAACAATAACTTGCTTGTTGGGGATGCTAAGGAGGTATTAAAAGTTGATAATATTCAACAATGCACTTCATCTTCTTCTAATTTGGTAATCAATAATAATGAAAGTGGGAGTTATCAACTACTTGAAGAAGAAAAGGAAAACAAGTTAGAGGAGAAAAGGGTTAAAGGTGGGAGAGTGAAGAAAACAACAAAAGTTCCAAGGTTTGCATTTCAGACAAGAAGTGTTGATGATATTTTGGATGATGGTTATCGTTGGAGGAAATATGGACAAAAAGCTGTCAAGAACAGCAAGTATCCCAGAAGCTACTATCGATGCACACATCACACATGCAACGTGAAGAAACAGGTGCAAAGGCTATCCAAAGATACTAGCATTGTGGTGACTACTTATGAGGGAATTCACAACCACCCATGCGAGAAGCTGATGGAAACTCTAACTCCTCTTCTAAAGCAAATACAGTTTCTTGCTAGCTTGTAA 660 0.3864 MESQDPPNPPPPLMNMPSPQAQNNNTSLPFFFTPSLQNYPLESQDQGLGDIEWGNFFLGQNNNNLLVGDAKEVLKVDNIQQCTSSSSNLVINNNESGSYQLLEEEKENKLEEKRVKGGRVKKTTKVPRFAFQTRSVDDILDDGYRWRKYGQKAVKNSKYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLASL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02210 219 Pfam WRKY DNA -binding domain 141 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g02210 219 MobiDBLite consensus disorder prediction 1 26 - -
Mepo3g02210 219 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 47 201 IPR044810 GO:0003700
Mepo3g02210 219 MobiDBLite consensus disorder prediction 1 17 - -
Mepo3g02210 219 FunFam WRKY transcription factor 57 126 200 - -
Mepo3g02210 219 Coils Coil 92 112 - -
Mepo3g02210 219 Gene3D WRKY domain 125 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g02210 219 SMART WRKY_cls 140 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g02210 219 SUPERFAMILY WRKY DNA-binding domain 134 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g02210 219 ProSiteProfiles WRKY domain profile. 135 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02210 Mepo-Chr3 31804745 31808129 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02210 105 219 WRKY Transcription Factor Family AT5G41570 70.435 9.90e-57 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo3g02210 WRKY 1.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02210 - - cam:101497701 279.256