Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02207 ATGGAAGAAGATTGGGATCTCCATGCGGTGGTTAGAGGTTGCTCCACCACTTCAACCACCACACCTACATCCTCTGTTTCTTCTTCCTCTGTTTTTCCCCTGCAACCTGAACCTTCATGTGCCTACTCTTCTATTTTTAGTAGTGAACAAAAACCTCAAATTTTGTCACTTTCTTGTTCTACACACCCTTTTGAAGCTAGAAACTCCATTGAAGAGTTGCATGAACTTTGCAAACCTTTCTTTTCTAGATCATCACAGCCTCTTTCTTTGCAAACTTCTCCTTTGTTTTCTTCATTCTCTTATTCCTCTGCTTCACCCAAATTAGCTCAAACACAAGACAAACAACAATTGCAAAGAAGTAAACATTCACACCAAGGTGGTTCTCTCACCAACCCAAGATCAAAAAGAAGGAAAAATCAACTTAAGAAAGTTTGTCAAGTACCAGTTGAGAGTCTCTCTTCAGATATATGGGCATGGAGAAAATATGGACAAAAACCTATAAAAGGGTCACCATATCCAAGGGGATATTATAGATGTAGCAGTTCAAAAGGGTGTTTAGCAAGAAAACAAGTTGAAAGAAACAGAACAGATCCAACAATGTTCATAGTAACATATACATGTGAACACAATCATCCTGCTCCAACACACAAAAACTCTCTTGCTGGTTCAACACGGCAGAAGCCATTAACACCACCTCAAGGTGAAACCAACAAAGATCTTACAAAACCCTCTTCTCCTGCTACATCAGGAGGTGAAGAAGAGGTTCAAACTCAAGGAGAAAAGTCAGAAAGTAGAGAAGAGAAGGAAGATTCTACAATGGATGATGAAGAAGGAGATGAATTTGGTTTATCTGATGTTGTTTTAAGTGATGATTTCTTTGAGAGTTTAGATGAATTTGGTTTCACAGATCCATTTTCTTCTGCTATTGCAATTCCTAATTGGGTGGCTAATAGTGCTGCTGCTGCTACAGCTGCTGGTGGTAGCTGA 987 0.3931 MEEDWDLHAVVRGCSTTSTTTPTSSVSSSSVFPLQPEPSCAYSSIFSSEQKPQILSLSCSTHPFEARNSIEELHELCKPFFSRSSQPLSLQTSPLFSSFSYSSASPKLAQTQDKQQLQRSKHSHQGGSLTNPRSKRRKNQLKKVCQVPVESLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRTDPTMFIVTYTCEHNHPAPTHKNSLAGSTRQKPLTPPQGETNKDLTKPSSPATSGGEEEVQTQGEKSESREEKEDSTMDDEEGDEFGLSDVVLSDDFFESLDEFGFTDPFSSAIAIPNWVANSAAAATAAGGS 328
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02207 328 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 305 IPR044810 GO:0003700
Mepo3g02207 328 Pfam WRKY DNA -binding domain 155 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g02207 328 ProSiteProfiles WRKY domain profile. 148 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g02207 328 MobiDBLite consensus disorder prediction 211 255 - -
Mepo3g02207 328 Gene3D WRKY domain 137 207 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g02207 328 SMART WRKY_cls 153 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g02207 328 MobiDBLite consensus disorder prediction 211 285 - -
Mepo3g02207 328 MobiDBLite consensus disorder prediction 108 134 - -
Mepo3g02207 328 MobiDBLite consensus disorder prediction 269 284 - -
Mepo3g02207 328 MobiDBLite consensus disorder prediction 108 144 - -
Mepo3g02207 328 SUPERFAMILY WRKY DNA-binding domain 152 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g02207 328 FunFam WRKY transcription factor 22 137 207 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mepo3g02207 Mepo-Chr3 31781928 31783532 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02207 1 325 WRKY Transcription Factor Family AT4G01250 46.471 4.49e-80 244
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo3g02207 WRKY 9.1e-25 CL0274
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02207 3 31781928 31783532 Mepo4g04197 4 51856304 51857855 ECH
Mepo3g02207 3 31781928 31783532 Mepo3g02207 3 31781928 31783532 ECH
Mepo1g03812 1 44365709 44367968 Mepo3g02207 3 31781928 31783532 ECH
Mepo1g04364 1 51287650 51292804 Mepo3g02207 3 31781928 31783532 ECH
Mepo3g02207 3 31781928 31783532 Mepo1g03812 1 44365709 44367968 PCT