Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02193 ATGTCGATCTTTGATGGAACATTCCTCAACACACAACTCTCCAAACACACATCGATCTTCGGTCTCCGTTTATGGGTCGTCATCGGAATCTTAATCGGTGTCGCAATCGTCTTCATTCTCTTCTTAATCTCTCTGTGTGTAGTTTCACGTCGCCGTCACCGCCGCACCGGAGACTATAAGATCACCGGAGCTGTACCAGCTAAAGAAATCCAAGAGATCGTGCATGTTCCAGGTCCACACATGCTCAGGCGACCAACTCCGGTACCAGAGATCCACGTGGACATAGGAAGACAAGAACATCGTGTGGTTGTTAAATCTGATAAGGTTTCTAGTGGGGAGAGTAAGGGAACAGTGGGAAGTGGGTGTGAAACGACGTCGTCTTTTGGAAGTGGTAGTGTTGGTGGGATTGGACCTGAAGTGTCACATCTTGGATGGGGTAGATGGTATACTTTGAGAGAGCTTGAAGATGCTACTGGTGGATTGTGTCCTGAAAATGTTCTTGGTGAAGGTGGTTATGGAATTGTTTATCATGGTGTTCTTACTGATGGTACTAAAGTTGCTGTCAAGAATCTCTTGAATAACAAGGGCCAAGCTGAGAAAGAATTCAAAGTAGAGGTAGAAGCAATTGGTCGAGTACGACACAAAAATCTTGTTAGGCTGCTTGGATATTGTGTTGAAGGGGCCTACAGGATGCTTGTGTATGAATATGTGGACAATGGCAATCTTGAACAGTGGTTGCATGGGGATGTTGGACCTGTAAGCCCTTTGACGTGGGAAATACGCATGAACGTTATATTGGGAACAGCAAGAGGATTGGCCTATCTACATGAGGGTCTTGAACCAAAGGTTGTTCACCGAGATGTGAAATCAAGCAACATCCTCCTTGATCGCCAATGGAACTCCAAGGTTTCTGATTTCGGGCTTGCCAAGCTTTTGAATTCCGAGAATAGTTATGTCACGACTCGAGTTATGGGGACATTTGGTTATGTTGCACCAGAATATGCCTGCACTGGAATGCTGACCGAGAAGAGCGATGTTTATAGCTTTGGGATACTAATAATGGAGCTAATCACTGGGAGAAGTCCTGTCGATTATGGTAGACCACAAGGAGAGGTTAATTTAATAGAGTGGTTGAAGACTATGGTTGGTAATAGAAAAGCCGAGGAAGTGGTTGATCCTAAGCTACCTGAGTTGCCATCTTCAAAGGCTCTTAAACGCGCTCTGTTAATCGCTCTTCGGTGTGTTGATCCTGATGCAACAAAGAGGCCTAAAATGGGACATGTGATTCACATGCTCGAGGCAGACGACCTGTTATTCCATAATGATCGCAAAACTGGGGGAGAGTCTTCGCGATCTCTTAATGATTTTCAACCAGAGCATGAGGACTCAAATTTGGATAAGAGAACAGATGAAGGAATCAGTGGTCAAAGTGAACATGGTAGTGGTAGAAATAATAATCATCAGTCTAGGAGATGA 1476 0.4465 MSIFDGTFLNTQLSKHTSIFGLRLWVVIGILIGVAIVFILFLISLCVVSRRRHRRTGDYKITGAVPAKEIQEIVHVPGPHMLRRPTPVPEIHVDIGRQEHRVVVKSDKVSSGESKGTVGSGCETTSSFGSGSVGGIGPEVSHLGWGRWYTLRELEDATGGLCPENVLGEGGYGIVYHGVLTDGTKVAVKNLLNNKGQAEKEFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGPVSPLTWEIRMNVILGTARGLAYLHEGLEPKVVHRDVKSSNILLDRQWNSKVSDFGLAKLLNSENSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMELITGRSPVDYGRPQGEVNLIEWLKTMVGNRKAEEVVDPKLPELPSSKALKRALLIALRCVDPDATKRPKMGHVIHMLEADDLLFHNDRKTGGESSRSLNDFQPEHEDSNLDKRTDEGISGQSEHGSGRNNNHQSRR 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02193 491 ProSiteProfiles Protein kinase domain profile. 161 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02193 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 283 295 IPR008271 GO:0004672|GO:0006468
Mepo3g02193 491 Gene3D Transferase(Phosphotransferase) domain 1 237 445 - -
Mepo3g02193 491 FunFam Putative receptor-like serine/threonine-protein kinase 237 446 - -
Mepo3g02193 491 ProSitePatterns Protein kinases ATP-binding region signature. 167 189 IPR017441 GO:0005524
Mepo3g02193 491 SMART serkin_6 161 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02193 491 FunFam Probable serine/threonine-protein kinase At1g01540 141 236 - -
Mepo3g02193 491 Gene3D Phosphorylase Kinase; domain 1 138 236 - -
Mepo3g02193 491 CDD STKc_IRAK 167 433 - -
Mepo3g02193 491 SUPERFAMILY Protein kinase-like (PK-like) 140 433 IPR011009 -
Mepo3g02193 491 PANTHER OS01G0323000 PROTEIN 7 455 - -
Mepo3g02193 491 Pfam Protein kinase domain 165 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02193 491 MobiDBLite consensus disorder prediction 442 474 - -
Mepo3g02193 491 MobiDBLite consensus disorder prediction 442 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02193 Mepo-Chr3 31575886 31580147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02193 148 433 Trihelix Transcription Factor Family AT5G38560 49.658 4.45e-93 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Mepo3g02193 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02193 - - gmx:100817295 779.245