Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02171 ATGGGATTCCCCGTAGGGTACCCTGAAGTCTCCGTCCCCAACATCTTCCTCTACACTCTCTCTCTCCTCTCCTTCCTCCGTTCCCTCACCATCTCCTTCCTCTCTCTCCTCCATCTCTCCGACCTCCTCGACACCGACTTCTCCTCCACCACCCTACCAGACTCCCACATCCACCGTCCCACTCTCTCCGCAATCCTCATCAGAGAATTTCTCCCAATCATCACTTTCAATGACCTCGCCGGAGGAGATTCTTCACCGGCGGTGGGGTGTGCAGTGTGTTTAAACGAGTTCGCCGGAGAAGAAGAGATCAGATGTATGGCCAACTGTAGACATATGTTTCATCGGACGTGTGTGGACCGTTGGATTGATCATGATCAGAAAACATGTCCACTTTGTAGGACCCATTTTGTGCCTTATCATAAAATGGAAGATTATAATCAACGGTTATGGAATGATGCTGCTTCTGAAGATGAAGATGATGATGTTTCTCTTTTTTCTCATCATGATGATTATTACATTGCTAATGCTTCATTATGA 537 0.473 MGFPVGYPEVSVPNIFLYTLSLLSFLRSLTISFLSLLHLSDLLDTDFSSTTLPDSHIHRPTLSAILIREFLPIITFNDLAGGDSSPAVGCAVCLNEFAGEEEIRCMANCRHMFHRTCVDRWIDHDQKTCPLCRTHFVPYHKMEDYNQRLWNDAASEDEDDDVSLFSHHDDYYIANASL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02171 178 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 55 138 IPR013083 -
Mepo3g02171 178 ProSiteProfiles Zinc finger RING-type profile. 90 133 IPR001841 -
Mepo3g02171 178 SMART ring_2 90 132 IPR001841 -
Mepo3g02171 178 SUPERFAMILY RING/U-box 70 144 - -
Mepo3g02171 178 PANTHER RING ZINC FINGER PROTEIN-RELATED 33 168 - -
Mepo3g02171 178 Pfam Ring finger domain 90 133 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02171 Mepo-Chr3 31254069 31255133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02171 1 155 C3H Transcription Factor Family AT1G63840 44.304 1.45e-45 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02171 K16281 - gmx:100813224 185.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02171 3 31254069 31255133 Mepo3g02171 3 31254069 31255133 ECH
Mepo3g02171 3 31254069 31255133 Mepo1g03787 1 44095217 44095962 PCT