Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02167 ATGGGAGGTTGCTGTTGTTCCGCCAGAAAACATCATTTGCAAGGAACACCAGTTTATTACTATTGCCCGCCAACTTTTGAAGAGCGTGAGTCTTTAACCTCCAATGACGCTACCACTGCTTCGATCTCTGCTGGATTTCTGGTTGGCTTGAATCTGGAAGCATCCATACCTGATACATTCCGGTCTCCTCCTGTGCCTCTGCCTTATGACATTGTTTTCGGAGGTTCTGCATCACCTGATTCCGAGTCTTGCAAAGAAACTGTCAGTTTTAGTAGCTTCGAAACCTCAATAACACACGACGATATTGAAGAATCGGATTGTAAAACTATAGAAAAATCTGCATCTCTATCTCCAAGGAAGGTAGAACTATCAAAATCAAATGTTCAAGCATTGGCAACAGAAGAAGAGGATGGCTGCCCTATTTGTCTCGAAGAATATGACGACGATAATCCGAAAAATCTGACAAAATGTGAACATCATTTTCACCTATCTTGCATTCTTGAGTGGATGGAAAGAAGTGATTCTTGTCCTATATGTGACCAGAAAACTGCAAAAATAGGTATCGAAAATGACGGAAACATTGCAGGGGGAAGCAATAGCTTATCCTCTGCTGGGGAAACACTTGATAGAACCATTTCCAAGGGAGAAACACCACTTATCCAAGGAAAAGTGTTCTCTGATTCTATCGAAACAACAGAACTTCACCATGCTCCTGAAGGTCTCATTCAGACCAATGTTGGAGACTATTCTGGAATAAATAGCTTTGAAGATTTAACAAATGTAGTCATTGTTGAATCGTCGAGGCTTTGGGCGATTGCAAGCCCTATTTGTTTTGGAATATTATGCAATTATGCAATCAATACCTTTACAAATATTTTTGTTGGACATATTGGAGATTTAGAACTTACATCAGTTTCAATCTCTTTGTCTGTTGTTTCAAACTTCTCATTTGGCTTCATGCTTGGAATGGCAAGTGCACTAGAGACACTATGTGGACAAGCATATGGAGCAGGACAAGTAGATATGCTTGGTGTTTACATGCAACGTTCGATTCTAATCTTATTTGGTTCATGTTTTCTCATCTTACCGCTATACCTTTACGCAACACCGATCTTAAAACTCCTTGGACAAGAAGCTGATATAGCAGAACTAGCTGGAGTATTCACAGTCCAATCTATCCCTCAGTTATTTTCATTAGCCATCAATTTTCCAGCACAAAAATTCTTACAAGCACAAAGCAAAGTTGGAGTTTTGGCATGGTTGGGTTTCATATTCCTTATTGTTCATATTCTGATTCTGATTCTTTTTATTAAAGTGCTTGGTTGGGGTACAGCTGGTGCGGCTGCAGCTTATGATTTATCAGCTTGGGGAATTGCTTTGGCTCAAATGTTTTATGTTGTTGGTTGGTGTAAAGAAGGTTGGAGGGGTTTGTCTTGGTTGGCTTTTAAGGATCTTTGGGGTTTTACTAAATTGTCTTTTGCTTCAGCTATTATGCTTTGTTTAGAGGTTTGGTATTTTATGACCTTGATTGTTCTCACTGGACACTTGGATAATCCAATTATTGCTGTTGGCTCACTTTCAATATGCATGAATGTGAATGGGTGGGAAGGCATATTGTTCATAGGGGTCAATGCAGCTGTCAGTGTAAGAGTTTCCAATGCACTTGGATCAGGACACCCAAGAGCAGCAAAATATTCTGTGGTTGTCACAGTTGTTGAGTCTCTCATCATTGGAATAGTGTCTGCAGCCATTATTTTAGCTACAAAAGACCACTTTGCTGTCATTTTCACTGACAGTGTAGAAATGCAAAAGGCAGTTTCTAAGTTAGCATCTCTTCTTGGCATAACCATGATTCTAAATAGTGTTCAGCCAGTTTTATCAGGTGTTGCTGTAGGAGGAGGATGGCAAGCTTTGGTAGCTTACATTAATCTAATTTGTTATTACCTTATGGGACTCCCACTTGGTTTTTTACTTGGTTACAAGGGGGGCTATAGAGTACAGGGTATTTGGATTGGAATGATATGTGGGACAGTTTTGCAGACAGCTATCCTAGTGTATATTATCTATAAAACAAATTGGAACAAAGAGGTTGAACAAGCATCAGAAAGAATGAAGCAATGGACTGGACAGGAATTAGAATTGAGTGACATGTAG 2154 0.396 MGGCCCSARKHHLQGTPVYYYCPPTFEERESLTSNDATTASISAGFLVGLNLEASIPDTFRSPPVPLPYDIVFGGSASPDSESCKETVSFSSFETSITHDDIEESDCKTIEKSASLSPRKVELSKSNVQALATEEEDGCPICLEEYDDDNPKNLTKCEHHFHLSCILEWMERSDSCPICDQKTAKIGIENDGNIAGGSNSLSSAGETLDRTISKGETPLIQGKVFSDSIETTELHHAPEGLIQTNVGDYSGINSFEDLTNVVIVESSRLWAIASPICFGILCNYAINTFTNIFVGHIGDLELTSVSISLSVVSNFSFGFMLGMASALETLCGQAYGAGQVDMLGVYMQRSILILFGSCFLILPLYLYATPILKLLGQEADIAELAGVFTVQSIPQLFSLAINFPAQKFLQAQSKVGVLAWLGFIFLIVHILILILFIKVLGWGTAGAAAAYDLSAWGIALAQMFYVVGWCKEGWRGLSWLAFKDLWGFTKLSFASAIMLCLEVWYFMTLIVLTGHLDNPIIAVGSLSICMNVNGWEGILFIGVNAAVSVRVSNALGSGHPRAAKYSVVVTVVESLIIGIVSAAIILATKDHFAVIFTDSVEMQKAVSKLASLLGITMILNSVQPVLSGVAVGGGWQALVAYINLICYYLMGLPLGFLLGYKGGYRVQGIWIGMICGTVLQTAILVYIIYKTNWNKEVEQASERMKQWTGQELELSDM 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02167 717 SMART ring_2 139 179 IPR001841 -
Mepo3g02167 717 Coils Coil 690 710 - -
Mepo3g02167 717 ProSiteProfiles Zinc finger RING-type profile. 139 180 IPR001841 -
Mepo3g02167 717 PANTHER MULTIDRUG RESISTANCE PROTEIN 258 693 - -
Mepo3g02167 717 CDD RING-H2_AIRP1-like 135 181 - -
Mepo3g02167 717 Pfam Ring finger domain 139 179 IPR001841 -
Mepo3g02167 717 CDD MATE_eukaryotic 265 699 IPR045069 GO:0042910|GO:1990961
Mepo3g02167 717 Pfam MatE 275 432 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mepo3g02167 717 Pfam MatE 495 657 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mepo3g02167 717 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 114 187 IPR013083 -
Mepo3g02167 717 NCBIfam MATE family efflux transporter 275 670 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mepo3g02167 717 SUPERFAMILY RING/U-box 130 184 - -
Mepo3g02167 717 FunFam Putative E3 ubiquitin-protein ligase RHB1A 116 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02167 Mepo-Chr3 31203513 31212406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02167 1 182 C3H Transcription Factor Family AT4G00335 56.284 2.07e-68 221