Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02166 ATGTTGGGTAGTGAGCAAACTTTGGATTTGTATAAGCTGTTCATGGTGGTGAAGGACAAAGGTGGTTATGATGTTGTTTGTAAGAATGAGTTGTGGGATTTGGTTGGGGAAGAATATGGGTTGGGTGTGAAAGTTGGTTCTTCGGTTAAACTTGTTTATAGTAAGTATTTGAGTGGTCTAGAGACGCCTTTGAAGAATGTCGTTGATGGTGTGGGCGATAGAGTTAAATTTGGGGAGCGTTTAACGGAGTTGCAAGCGGAGTTGGTGTTGGATGATTATGGTGAGGGAGATGTCGGGGACGAAGTCAAGAGTGTATACGGATGTAGGAAGAAGTTGTGTGATACTAATAGAGTGAAGGTTGTGAATCCCGAGTTGAATGCGGTTGAACTCGAAAAGGTATATGAGTATATAGATGGGAGGAAGCCGTGTGGTACTAATAAAATGAAGGATACGAATCTTGTGTCTAATATGGCCAAGAAAGTTGAGAGTGAAGGACTAGTTGACATGCTTATGCAGGATTGTAAGACGAATGAGACTAGTCTCAGAAAGATGGTTAACCAAAATGCTGCAATGGAAATAATGGATGATGTATCCGATGTAGCAAACAGCATGCCTGGATTGTCAGACGGAAGCAAGAGCTGTGCTAATGATGATGCCAATGACAGCGGTGATGATGTCTTGATGTTGGACCCATCTAGTGTTAATAGAGAGAGCTTTGGTCGTAAGAGGAAGAGAGATGACTTGATGTCAGAAATGCAAAGTTGGGTTACTAGAACTGCAAAGAATCCTTGTGATCCTGTGTTAGGTTCAATGCCTGAAAAGTCAAAGTGGAAGTCTTACGGTAATCAAGAGATCTGGAAGAAGGTTTTGTTGTTTCGAGAAGCTGCCTTTCTGAAAAAAGATTTTGGATCAGACTGTGAAAAACTCAGCTGGCTGGCTCAGAGGATGCATCCTTCCATGTATGATGATAACCTTGGGGTAAATTACAATCTTAGACAACGGATCAAACGTGATAATGGAGTTTTAGTTGGAAAATCTGCATCTATCTTGCAAAGAACACCTGATTCCGAAGCTAAGGAAAAGTTACTCGACTCCTGTGTTCCAGAATCAATTCTTGATGCACCTCCCACAGTGAATATCCCTCTCGGGCCAAACCATCAAGCTGAAGTGCCCGAATGGACTGGCATAACTCACAAAAGTGATTCTAAGTGGCTGGGAACTCAAATATGGCCACTACAAATCGTAAAATCCAAACTTTTGGAAGGGGAACCTGTCGGACAGGGAAGACAAGATTCATGCCGTTGCCAGGTACAGGGTTCTGTCGAGTGTGTTCGATTTCACATTGCTGAGAAAAGCGCTAGACTCAAGCTGGAAATAGGTGTGGCCTTTTACCAGTGGAATTTAGACAAATCAGGGGAAGAAGTGAGGCGATGCTGGACAGCTCAAGAAGAGAAAAAGTTCAAAGATGTAGTGAAATCGAACCCTGCTTCGCTTGATAGATGTTTCTGGGACGATATTTTCACAACATTTCCCAAGAAGAGCAGGGAAAGTTTAGTCAGCTACTACTTCAATGTCTTTCTTTTGCAGCGCAGAGGATACCAGAACAGGCATACTCCTGATAACATTGACAGTGATGATGAAGAATCAGAATTTACACCATTGAAGGGTGCTTTTGGACATCAAACTGATAAATCAAACAGCTTCACCTTATTATCCCCTAAGAAACCACAGCCAACGCCACATACAAAAGGAAGACAGCTAGTGCATGGCCTCAAATCATGA 1782 0.4254 MLGSEQTLDLYKLFMVVKDKGGYDVVCKNELWDLVGEEYGLGVKVGSSVKLVYSKYLSGLETPLKNVVDGVGDRVKFGERLTELQAELVLDDYGEGDVGDEVKSVYGCRKKLCDTNRVKVVNPELNAVELEKVYEYIDGRKPCGTNKMKDTNLVSNMAKKVESEGLVDMLMQDCKTNETSLRKMVNQNAAMEIMDDVSDVANSMPGLSDGSKSCANDDANDSGDDVLMLDPSSVNRESFGRKRKRDDLMSEMQSWVTRTAKNPCDPVLGSMPEKSKWKSYGNQEIWKKVLLFREAAFLKKDFGSDCEKLSWLAQRMHPSMYDDNLGVNYNLRQRIKRDNGVLVGKSASILQRTPDSEAKEKLLDSCVPESILDAPPTVNIPLGPNHQAEVPEWTGITHKSDSKWLGTQIWPLQIVKSKLLEGEPVGQGRQDSCRCQVQGSVECVRFHIAEKSARLKLEIGVAFYQWNLDKSGEEVRRCWTAQEEKKFKDVVKSNPASLDRCFWDDIFTTFPKKSRESLVSYYFNVFLLQRRGYQNRHTPDNIDSDDEESEFTPLKGAFGHQTDKSNSFTLLSPKKPQPTPHTKGRQLVHGLKS 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02166 593 Gene3D - 2 69 IPR036431 GO:0003677
Mepo3g02166 593 MobiDBLite consensus disorder prediction 537 593 - -
Mepo3g02166 593 Pfam ARID/BRIGHT DNA binding domain 5 59 IPR001606 GO:0003677
Mepo3g02166 593 CDD SANT 479 526 IPR001005 -
Mepo3g02166 593 SMART ELM2_2 380 430 IPR000949 -
Mepo3g02166 593 SMART bright_3 2 66 IPR001606 GO:0003677
Mepo3g02166 593 MobiDBLite consensus disorder prediction 204 245 - -
Mepo3g02166 593 MobiDBLite consensus disorder prediction 559 576 - -
Mepo3g02166 593 CDD ARID 6 61 - -
Mepo3g02166 593 ProSiteProfiles ARID domain profile. 1 65 IPR001606 GO:0003677
Mepo3g02166 593 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 577 - -
Mepo3g02166 593 MobiDBLite consensus disorder prediction 537 553 - -
Mepo3g02166 593 SUPERFAMILY ARID-like 6 65 IPR036431 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02166 Mepo-Chr3 31177444 31182673 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mepo3g02166 ARID 2.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02166 - - tpra:123892530 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02166 3 31177444 31182673 Mepo3g02166 3 31177444 31182673 ECH