Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02146 ATGGCTGTGGTGAGTCCTATGCCTGCAACAATACAAAGAACAGGTTCTGTGAATTCGGTTCGCGAAGTTCGGGGAGAAATTGAAGAGGAACCTGATCAAACTGTGGTTGATGAGGCAATCTATGTTACTGTGTCAAAGGATGTAAAAGAGAGTAAATTGAATTTGATTTGGGCAATACAGAATTCTGGTGGAAAAAAGATCTGTATCCTCTTTGTTCATGTGCCTGCAACAATGATCCCTTTGATGGGTGCTAAATTCCCCGCAAGTTCATTGAAGGATCAAGAAGTCCAAGCTTACCGGGAAATGGAAAGGCAAAACGTGCATAAGACTCTTGATGAATATCTTCGAATCTGTCAACGGATGGGGGTGCGAGCAGAGAAATTGCATATCGAAATGGAGAACATTGAAAAAGGAATAATCGAACTTATCTCTCAGTATGGAATCCGAAAGCTTATTATGGGAGCAGCATCTGATAAGAGTTATTCTAGGAGAATGATGGACCTCAGATCTAGGAAAGCCATCTACGTATGTGAACAAGCTCCATCTTCTTGCCATATACAGTTTATCTGCAAAGGCCACCTTATACACACAAGGGATCGCAGTTTAGATGAACGAAACGTAGAGGTTGCATCTCCTTTGCTGCAGCAAGTGCCTAACTCTGTGAGACCTTCAAGATCTCAATCTATCACACTGGGGCAAAATTATAGGACAAATTCAATAAGTTCTTCACAAGAGTTGTTTCGCCGAGTGAGGTCTGCCAATGATGGAATGACAGCTAGCATTACAACTAATTCTTCTCCAGTTGACACTGAGGGGTTTTCAACTCCACGTAACAGGCGAGGTACAGAAGTAAGTTCTGATGAGTCTGATAGGTTGTCAAGGATGAGTCCTTCAGGTTTGTCAACTTTCTCCGATAGTGCAATTGATCCAACACTGACGCCATATTCTGTTGCCGAGAGCTGTGAGAATGCATCCGACTTGACTTTGAGTCACCTGATTAAAGACGAGGATCTTCGTCATTTATCACCTCCAAGTGTACTGCAGGATGGTGGAGTGAATGATACGCTCTATGACCAACTCGAACAAGCTATGTCCGAGGCTAATAATGCTACTCGACATGCATACCAAGAAACTTTTAGACGTGGGAAAGCTGAAAAAGATGCCATTGAAGCCATACGCAGGGCTAAAGCATCTGAAAGCTTATATACAGATGAATTGAATCTGAGGAAAATGGCGGAGGAAGAACTAAGAAAGTTAAAAGATGAACTTGAGAGTGTGACGAGCCAGAGAGACAAAGTAAATGAAGAACTTCGACTTGCTGTGGATCTGAAGTCATCACTAGAGAGTCAACTTGCATCGTCTGAAGTTATGATACAGGAGTTGGAGCAGAAGATCATATCTGCTGTGGAGCTGCTACAAAGCTACAAGAACGAGCGAGATGAATTGCAGATCCAGCGTGATAATGCATTGAGAGAGGCTGAAGATCTGAGGAAAAAACAAGGAGAAGGCTCAAGCAATCATGTGCCTCAATTGTTCTCAGAATTCTCTTTTTCAGAAATCGAAGAAGCAACAAGTAACTTTAATCCATCTCTAAAGATCGGAGAAGGTGGATATGGAAATATATATAAAGGTCTACTCCGTCACACCGAAGTGGCTATAAAAATTTTGCATGCCAACAGCATGCAAGGACCCTTGGAGTTTCAGCAGGAGGTGGATGTATTGAGTAAGCTAAGGCATCCCAATCTGATCACTCTTATAGGAGCCTGTCCGGAATCCTGGTCTCTTGTCTACGAGTATTTGCCAAACGGAAGCCTCGAAGACCGTCTTGCCTGCAAGGATAACACGCATCCATTATCATGGCAAACACGGATTCGAATAGCTGCAGAACTCTGCTCCGCTCTCATCTTTCTTCATTCAAGTAAACCTCACAGCATAGTGCATGGTGACTTGAAACCCTCCAATATCATTCTGGATGGAAACCTTGTCAGTAAGCTTAGCGACTTTGGAATCTGTCGCATATTATCAAATTACGAGAATTCTAGTAATAGTAATACACAGTTTTGGAAAACTGATCCAAAGGGAACTTTTGTCTACATGGATCCTGAATTCCTTGCTTCTGGTGAACTCACTCCGAAATCAGATGTTTATTCTTTTGGAATCATATTATTGAGATTGTTGACTGGGAGACCGGCATTGGGAATAACTAAGGAAGTGAAATATGCAGTAGATACCGGAAAGTTGACATCTTTATTGGATCCTTTGGCTGGAGACTGGCCATTTGTGCAGGCTGAACAGTTAGCTCGCTTGGCCTTGCGGTGTTGTGAGATGAATAGGAAGAGCCGTCCGGACCTTCATTCAGATGTATGGAGGATATTGGATGCAATGAGGGCTTCTTCTGGTGGTACAAACTCCTTTGGTCTAAGTTCTGAAGGGCCACACCAACCTCCTTCATATTTTATTTGTCCAATCTTCCAGGAAGTCATGCGAGATCCACATGTAGCTGCAGATGGTTTTACTTACGAAGCGGAGGCTATCCGAGGATGGCTGGACAGTGGTCATGACACTTCACCGATGACAAATAGTACGCTTTCACATCAGAATCTTGTCCCCAACCGCGCTCTTCGTTCTGCAATTCAGGACTGGCTTCAAAGTCACTGA 2658 0.4323 MAVVSPMPATIQRTGSVNSVREVRGEIEEEPDQTVVDEAIYVTVSKDVKESKLNLIWAIQNSGGKKICILFVHVPATMIPLMGAKFPASSLKDQEVQAYREMERQNVHKTLDEYLRICQRMGVRAEKLHIEMENIEKGIIELISQYGIRKLIMGAASDKSYSRRMMDLRSRKAIYVCEQAPSSCHIQFICKGHLIHTRDRSLDERNVEVASPLLQQVPNSVRPSRSQSITLGQNYRTNSISSSQELFRRVRSANDGMTASITTNSSPVDTEGFSTPRNRRGTEVSSDESDRLSRMSPSGLSTFSDSAIDPTLTPYSVAESCENASDLTLSHLIKDEDLRHLSPPSVLQDGGVNDTLYDQLEQAMSEANNATRHAYQETFRRGKAEKDAIEAIRRAKASESLYTDELNLRKMAEEELRKLKDELESVTSQRDKVNEELRLAVDLKSSLESQLASSEVMIQELEQKIISAVELLQSYKNERDELQIQRDNALREAEDLRKKQGEGSSNHVPQLFSEFSFSEIEEATSNFNPSLKIGEGGYGNIYKGLLRHTEVAIKILHANSMQGPLEFQQEVDVLSKLRHPNLITLIGACPESWSLVYEYLPNGSLEDRLACKDNTHPLSWQTRIRIAAELCSALIFLHSSKPHSIVHGDLKPSNIILDGNLVSKLSDFGICRILSNYENSSNSNTQFWKTDPKGTFVYMDPEFLASGELTPKSDVYSFGIILLRLLTGRPALGITKEVKYAVDTGKLTSLLDPLAGDWPFVQAEQLARLALRCCEMNRKSRPDLHSDVWRILDAMRASSGGTNSFGLSSEGPHQPPSYFICPIFQEVMRDPHVAADGFTYEAEAIRGWLDSGHDTSPMTNSTLSHQNLVPNRALRSAIQDWLQSH 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02146 885 Coils Coil 402 436 - -
Mepo3g02146 885 SMART Ubox_2 818 881 IPR003613 GO:0004842|GO:0016567
Mepo3g02146 885 ProSiteProfiles Protein kinase domain profile. 527 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02146 885 CDD STK_N 40 192 - -
Mepo3g02146 885 Gene3D Transferase(Phosphotransferase) domain 1 600 804 - -
Mepo3g02146 885 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 813 885 IPR013083 -
Mepo3g02146 885 PANTHER OS02G0152300 PROTEIN 40 880 - -
Mepo3g02146 885 Pfam Protein kinase domain 531 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02146 885 Coils Coil 353 377 - -
Mepo3g02146 885 SUPERFAMILY RING/U-box 809 884 - -
Mepo3g02146 885 FunFam receptor-like protein kinase FERONIA 491 599 - -
Mepo3g02146 885 CDD RING-Ubox_WDSUB1-like 816 871 - -
Mepo3g02146 885 Gene3D HUPs 32 166 IPR014729 -
Mepo3g02146 885 Coils Coil 444 499 - -
Mepo3g02146 885 MobiDBLite consensus disorder prediction 257 280 - -
Mepo3g02146 885 ProSitePatterns Protein kinases ATP-binding region signature. 533 554 IPR017441 GO:0005524
Mepo3g02146 885 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Mepo3g02146 885 MobiDBLite consensus disorder prediction 257 305 - -
Mepo3g02146 885 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 56 165 - -
Mepo3g02146 885 MobiDBLite consensus disorder prediction 291 305 - -
Mepo3g02146 885 SUPERFAMILY Protein kinase-like (PK-like) 503 785 IPR011009 -
Mepo3g02146 885 Pfam U-box domain 816 885 IPR003613 GO:0004842|GO:0016567
Mepo3g02146 885 ProSiteProfiles U-box domain profile. 814 885 IPR003613 GO:0004842|GO:0016567
Mepo3g02146 885 Gene3D Phosphorylase Kinase; domain 1 512 599 - -
Mepo3g02146 885 SMART serkin_6 527 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02146 Mepo-Chr3 31011671 31017944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02146 1 885 U-box Gene Family AT2G45910 55.269 0.0 949
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mepo3g02146 Pkinase 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02146 - - gmx:100807515 1389.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02146 3 31011671 31017944 Mepo1g03766 1 43833532 43835706 PCT