Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02140 ATGGCAACTGATATGCAAAGGCTGGTTGGAATGGGTGAGGATGGCGAAGAAATGGGAATGGGTATGAAAGATGATGACGATGAGGATGCCGATTATGACGAAAATGGAGGTGAGCATGGAAATGTTTCGGGGATGGTAGAGATTGATGGTGGGAGTGGGATGGGAACTGGAGCCGGTGACAACAGGTTTCAGCAGCACCACGAGTTTCAAGAGCAAGTAGGCACTCCGGGTGGAGGTAATCGAAGATCTAGACCGGTAGAAGAGAAAGAGAGAACAAAGCTAAGAGAGAGGCGTCGGAGGGCTATCACTGCAAGGATCTTGGCAGGGCTTCGCAGGCATGGCAATTATAATCTTAGAGTTAGGGCTGACATTAATGATGTCATTGCTGCCCTAGCAAGGGAAGCTGGATGGGTGGTTCTTCCAGATGGAACTACTTTTCCTTCAAAATCTCAGGGACAGATGCCAGCTGGTGGTAATTCTGCAGTTGTTACTTCATCATCAACCCACGTGCCTTCCCAACAGCCTCCATCTGTTTCCCTCAGGGGAGTTGCTTCTGGCTATGGGAGCCCTTTAGAGTATAGTGCATGTCCAATGAAAGATGTTTTCATTCCATCTCCATCTCCATATGATCTGTCCTCAAGTTCCCGATCTCAAACATCTATGTTGGGGGATAGGGAAGCGCAAAGAGACAATCCTCCCTTGATTGGTGGTTCAATAGACACCATTAATGAGAAACAGATTGCTGATATTCCCCCCAGATTACCAGAACGTGATTTTGCTGGGAGCCCTTATGTTCCTGTTTATGTGATGCTACCGTTGGGGGTGATCAATATTAAATGTGAGCTTGTTGATCCGGATGGCATACTAAAGCAGCTGAGGGTATTGAAATCAGCAAATGTTGATGGTGTTATGGTTGACTGTTGGTGGGGAATAGTGGAGGCACATGCTCCTCAAGAGTATAATTGGAATGGTTACAAGAGACTCTTTCAAATGGTGCGTGAGCTTAAGCTTAAGTTGCAGGTTGTCATGTCATTTCACGAATGTGGAGGCAACTTTGGTGATGATGTTTGTATTCCATTACCCCATTGGATTGCGGAAATTGGTAGGAGCAATCCAGATATTTTTTTCACTGATAGAGAGGGAAGACACAACCCTGAATGTCTTTCCTGGGGAATAGATAAGGAACGTGTTTTGAGAGGTCGGACTGCTGTGGAGGTGTATTTTGATTTCATGAGAAGTTTCCGGATAGAGTTTAATGAGTATTTTGAGGATGGCTTCATCTCCATGATTGAAGTTGGACTAGGTCCATGTGGAGAGCTAAGATACCCATCTTGTCCTGTAAAGCATGGTTGGAGATATCCTGGTATTGGTGAGTTCCAGTGCTATGATCAGTATATGTTGAAAAGTCTTAGGAAAGCAGCAGAAGAAAGAGGGCACACTATTTGGGCTAGAGGGCCAGATAATGTGGGTACCTACAATTCTCAGCCACACGAAACAGGTTTCTTTTGCGATGGGGGTGATTATGATGGCTTCTATGGCAGGTTTTTTCTCAACTGGTACTCTCAGTCTTTAGTTGATCATGGAAACCGGGTACTTTCGATGGCAAAATTAGCTTTTGAGGGATCCTGCATTGCTGCAAAGCTATCAGGTATTTATTGGTGCTACAAGACTGCTAGTCATGCTGCTGAATTAACTGCTGGATACTATAATCCTTGCAATCGTGATGGCTATGCTGCAATTACAGCAATGTTAAAGAGAAACGGCGTTAACTTAAACATTGCCTGTGTTGATTTGCACACATTCAATCAACACGAGAGCTTTCCAGAGCCATTTGCTGATCCTGAGCGATTAGTTTGGCAAGTGTTGAATGCTGGGTGGGATGTTGGATTACCCGTCGTCAGTGAGAATGCACTTCCTTGCCTTGACAGAGTTAGCTATAACAAGGTTTTGGATAATACCAAGCCCATTAATGATCCAGATGGAAGGCACTTTTCATCCTTTACATACCTGAGGCTCAGTCCACTTCTGATGGAACGACCGAACTTAATAGAGTTTGAAAGATTTGTCAAGAGAATGCACGGAGAAGCTGTTCTTGATCTTCAGGTATAA 2109 0.4462 MATDMQRLVGMGEDGEEMGMGMKDDDDEDADYDENGGEHGNVSGMVEIDGGSGMGTGAGDNRFQQHHEFQEQVGTPGGGNRRSRPVEEKERTKLRERRRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSKSQGQMPAGGNSAVVTSSSTHVPSQQPPSVSLRGVASGYGSPLEYSACPMKDVFIPSPSPYDLSSSSRSQTSMLGDREAQRDNPPLIGGSIDTINEKQIADIPPRLPERDFAGSPYVPVYVMLPLGVINIKCELVDPDGILKQLRVLKSANVDGVMVDCWWGIVEAHAPQEYNWNGYKRLFQMVRELKLKLQVVMSFHECGGNFGDDVCIPLPHWIAEIGRSNPDIFFTDREGRHNPECLSWGIDKERVLRGRTAVEVYFDFMRSFRIEFNEYFEDGFISMIEVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYMLKSLRKAAEERGHTIWARGPDNVGTYNSQPHETGFFCDGGDYDGFYGRFFLNWYSQSLVDHGNRVLSMAKLAFEGSCIAAKLSGIYWCYKTASHAAELTAGYYNPCNRDGYAAITAMLKRNGVNLNIACVDLHTFNQHESFPEPFADPERLVWQVLNAGWDVGLPVVSENALPCLDRVSYNKVLDNTKPINDPDGRHFSSFTYLRLSPLLMERPNLIEFERFVKRMHGEAVLDLQV 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02140 702 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 559 570 IPR001554 GO:0000272|GO:0016161
Mepo3g02140 702 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 508 527 IPR001554 GO:0000272|GO:0016161
Mepo3g02140 702 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 320 338 IPR001554 GO:0000272|GO:0016161
Mepo3g02140 702 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 617 639 IPR001554 GO:0000272|GO:0016161
Mepo3g02140 702 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 435 457 IPR001554 GO:0000272|GO:0016161
Mepo3g02140 702 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 542 558 IPR001554 GO:0000272|GO:0016161
Mepo3g02140 702 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 299 313 IPR001554 GO:0000272|GO:0016161
Mepo3g02140 702 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 577 600 IPR001554 GO:0000272|GO:0016161
Mepo3g02140 702 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 342 363 IPR001554 GO:0000272|GO:0016161
Mepo3g02140 702 MobiDBLite consensus disorder prediction 207 225 - -
Mepo3g02140 702 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 217 695 IPR001554 GO:0000272|GO:0016161
Mepo3g02140 702 Pfam BES1/BZR1 plant transcription factor, N-terminal 79 214 IPR008540 -
Mepo3g02140 702 MobiDBLite consensus disorder prediction 148 179 - -
Mepo3g02140 702 Pfam Glycosyl hydrolase family 14 268 684 IPR001554 GO:0000272|GO:0016161
Mepo3g02140 702 MobiDBLite consensus disorder prediction 19 34 - -
Mepo3g02140 702 MobiDBLite consensus disorder prediction 1 96 - -
Mepo3g02140 702 MobiDBLite consensus disorder prediction 207 238 - -
Mepo3g02140 702 SUPERFAMILY (Trans)glycosidases 259 698 IPR017853 -
Mepo3g02140 702 Gene3D Glycosidases 256 701 - -
Mepo3g02140 702 MobiDBLite consensus disorder prediction 82 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02140 Mepo-Chr3 30884767 30890552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02140 1 699 Glycoside Hydrolase AT2G45880 64.957 0.0 931
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Mepo3g02140 Glyco_hydro_14 6.3e-103 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02140 K01177 - gmx:100805560 1190.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02140 3 30884767 30890552 Mepo3g02140 3 30884767 30890552 ECH