Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02118 ATGGAACTTTCTCAACTTGGTTTTCTTGAGGAGCTACTAGCTCCAAGAAAAGACACATGGAATACTTTATCCAATGGTTTGAATGAGTTACTACTCCCTAATGGTTGGACCTTTGACTCATTTGATGAAAATCTTCTCATCAATCCATCTTTAAACCCTTCATTTGCTTCATTCTCAACACCATTAGACCATAGATTTGAATGTCCTTATGGAACTGATGCATCATCATACCCTTATCTTGATGGATTCTCAGTTCCTGAGTTTGATGATTCAGCACCAGTTTTACCACAACAAGAAAGTATTGAAGAGTTTAGATTTGTTGGAAGTGAGAACAAGAGTTTGGAACAAAGTAAAATCAGCTGCAAAGTTGAGGAACAAGTTTGTGAGACTCAAGTTTTTAACATGGGTTTGTGTGATGAGAAAAAAGCCAAATCCAAAAGGGTTGAAGGACAGCCTTCAAAGAATCTTATGGCTGAAAGGAGAAGAAGAAACCGTTTGAATGACAGGCTTTCCATGCTTAGGTCAATTGTCCCTAAGATCAGCAAGATGGACAGGACATCAATTCTTGGAGATACAATTGATTACATGAAAGAGCTTCTAGAAAGGATTAGTAAGTTACAAGAAGAAATGGAGGAAGACGGAACAAATCAGATAAACCTTTTAGGAATTTCTAAGGAGTTAAAGCCAAATGAAGTAATGGTAAGAAATTCCCCTAAGTTTGATGTTGAGAGGAGAGACCAGGACACAAGAATCAGTATCTGTTGTGCCACAAAGCCAGGATTGTTACTGTCAACAGTGAACACATTAGAAGCATTAGGCCTTGAGATTCACCAGTGTGTTATAAGCAGTTTCAATGATTTTTCATTGCAAGCATCTTGCTCAGAGTTAGCTGGTCAGAGAAATTGTATGAACCCTGAAGAGATAAAGCAATCACTATTCAGGAATGCAGGTTATGGTGGGAGATGTCTCTAG 972 0.3817 MELSQLGFLEELLAPRKDTWNTLSNGLNELLLPNGWTFDSFDENLLINPSLNPSFASFSTPLDHRFECPYGTDASSYPYLDGFSVPEFDDSAPVLPQQESIEEFRFVGSENKSLEQSKISCKVEEQVCETQVFNMGLCDEKKAKSKRVEGQPSKNLMAERRRRNRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERISKLQEEMEEDGTNQINLLGISKELKPNEVMVRNSPKFDVERRDQDTRISICCATKPGLLLSTVNTLEALGLEIHQCVISSFNDFSLQASCSELAGQRNCMNPEEIKQSLFRNAGYGGRCL 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02118 323 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 150 199 IPR011598 GO:0046983
Mepo3g02118 323 Gene3D - 139 214 IPR036638 GO:0046983
Mepo3g02118 323 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 153 213 IPR036638 GO:0046983
Mepo3g02118 323 Coils Coil 196 216 - -
Mepo3g02118 323 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 112 317 - -
Mepo3g02118 323 SMART finulus 156 205 IPR011598 GO:0046983
Mepo3g02118 323 CDD ACT_UUR-ACR-like 249 290 - -
Mepo3g02118 323 Pfam Helix-loop-helix DNA-binding domain 156 199 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02118 Mepo-Chr3 30632461 30634297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02118 11 323 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 47.647 1.10e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo3g02118 HLH 5.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02118 - - gmx:100806571 513.842