Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02115 ATGGGAAGGACACCTTGTTGTGATAAGAAGGGTTTGAAGAGAGGACCTTGGACTGCTGAAGAGGATGAAATTCTTGCTAACTATATTAAGAAGAATGGTGGTCATGGAAGCTGGCGTTCTCTTCCCAAGATCACAGGTCTTCTTCGTTGTGGTAAGAGTTGTAGGCTTAGATGGACCAACTATCTAAGACCTGACATTAAACGTGGACCCTTTACTCCTGAGGAAGAAAAATTAGTCATTCAGCTTCACGCTATCCTTGGAAATAGGTGGGCTGCAATTGCATCTCAGTTACCCGGAAGAACAGACAATGAGATAAAGAACTTTTGGAACACACATTTGAAGAAACGTCTCAAAAGCTTGGGAATTGATCCAAAAACACATGAGCCAGTAGCCTCATCAACTAGTTACCCAAATCACAAGTCACATGCATCGATTTCAACACGTCACACGGCTCAATGGGAGAGTGCAAGGCTTGAAGCAGAAGCAAGACTCTCAATTGAGTCATCACACTTCAACACCAATCCTAATTCCTTCGCAAAAACTGATTCTTCTTCTGATTATTTCCTCCGTATATGGAACTCTGAAGTTGGAGATGCATTTCGCAAGGTTCAAAAACCAGATACAGATCATAATAACATAATTACTAGTTGCTGTCAGAGTCCTATTTCTGCAGGATCTTTATCTTCCAACAAATGTGACTCCATTTCTGCTGTTACAGCAAGCAATAATTCTGTGAAAGAAGAGTTGGATTGGAGGAACTACAAGTTTAGTGCTGAAGATGTGATTCTTGAATCTGATTCATCAAGCTCCAATGACTTGCAAGATTCATCAGACACTGCTTTGCAGCTCTTGTTTGATTTTCCTATGAACAATGACATGAGCTTCTTAGGAAACTCTTTTGCTTCTCCCTTTTAG 915 0.4077 MGRTPCCDKKGLKRGPWTAEEDEILANYIKKNGGHGSWRSLPKITGLLRCGKSCRLRWTNYLRPDIKRGPFTPEEEKLVIQLHAILGNRWAAIASQLPGRTDNEIKNFWNTHLKKRLKSLGIDPKTHEPVASSTSYPNHKSHASISTRHTAQWESARLEAEARLSIESSHFNTNPNSFAKTDSSSDYFLRIWNSEVGDAFRKVQKPDTDHNNIITSCCQSPISAGSLSSNKCDSISAVTASNNSVKEELDWRNYKFSAEDVILESDSSSSNDLQDSSDTALQLLFDFPMNNDMSFLGNSFASPF 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02115 304 Gene3D - 70 146 - -
Mepo3g02115 304 MobiDBLite consensus disorder prediction 124 144 - -
Mepo3g02115 304 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mepo3g02115 304 Gene3D - 11 68 - -
Mepo3g02115 304 SMART sant 13 64 IPR001005 -
Mepo3g02115 304 SMART sant 67 115 IPR001005 -
Mepo3g02115 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mepo3g02115 304 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Mepo3g02115 304 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mepo3g02115 304 CDD SANT 16 62 IPR001005 -
Mepo3g02115 304 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mepo3g02115 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Mepo3g02115 304 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 251 - -
Mepo3g02115 304 MobiDBLite consensus disorder prediction 128 144 - -
Mepo3g02115 304 FunFam MYB transcription factor 70 117 - -
Mepo3g02115 304 CDD SANT 70 113 IPR001005 -
Mepo3g02115 304 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Mepo3g02115 304 FunFam Myb transcription factor 11 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02115 Mepo-Chr3 30580327 30583546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02115 1 296 MYB Transcription Factor Family AT3G61250 61.204 1.90e-114 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo3g02115 Myb_DNA-binding 6.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02115 K09422 - gmx:100816569 437.958