Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02111 ATGAGTATTGATATAGGTTGTAGTTTGCCACAGTCAAGAATTTTACACGGAGGCGCGGGGACTAGTTATGGACAAAAATATGTAGGTCAAGTAGGTTGTTTTGACTTTAGAAGGAGAGGTTTTGGTTGTGGTTTATTGGGTAAAAGTGTTTTGAGGTCGCGTTTTAGTGTGGAGAACAAAGCTAGTTGTGTTTCTGCTTTGAATGATTCTGGTGGTGAGTTTAAAGTTTTGAACACGAAGAGAAGTGTGTCATGTAAGAATGAGAAACTTCTTATGGGATCTAGAAAGATTTGGTTGAAGTGTCAGGGTAATGATTCTTTAGCTTATGTTAATGGAAATGGCCGCAATGTTGATTATGTGGAAGGTTCGGGTGAGGATGTAGGGGTTGAATTGGATGTTTTAGGGGAAGAAGAAGGAGGGAAGGCTGAGAGGGAAATAGGAGTAGAGGAAAATAATGTTGATGAATTGAAAGAACTATTGCAAAAGGCCTTGAAAGAGCTTGAGGTAGCACAACTAAATAGTACTATGTTTGAAGAAAAGGTTAAAAAAATATCAGAGACTGCCATTTTTTTGCATGATGAAGCAGCCCGATCTTTGAATGATGTTAATTCTACCCTTGACAGCATTCAAAAAGTTGCAAATGAAGAACATATTGCTAAAGATGCTGTCCAAAATGCTACAATGGCTCTTTCATTGGCCGAGGCAAAACTTCAGGTAGCTATAGAGTCTTTAGAGGCCGCGAAAGAAGTGCATGAAAGTTCTAATGAGAGTGATGGCGATAAGGACTTGACAGAAAAGGAGAGCACGCTTTTTGTTGCGCAAGAAGATATAAAGAAATGTCAGGATAATTTGACAAATTGTGAGGTAGAGTTGAGGCACTTGCAAAATAAAAAGGAGGAGCTGCAAAAGGAAGTTAGCAAATTGCAAGAAATTTCTGAAAAGGCACAACTGGATGCAGTGAAAGCTGAGGAGGATGTTACAAACATAATGCTTTTAGCAGAGCAAGCTGTTGCGTTTGAACTTGAGGCTACACAACGTGTGAACGATGCTGAGATTGCTTTACAGCGAGCTGATAAGTCTTTTCAAAATTTGAATGCTGACGCTGTAGAAACTATACAAGTAGAAGATGTCGTTCTTGTTTCTGAGGAGAACATGGTAGAAAGTTATTCTGATGATGTCACAGTTGGTAGTGACAAAGATTTGGCCACAAGTGATGATGCATCTTTGCTTGCCAAGTTACCACCTGAAACACAACCTGAAAAAACCGGCCAAATTTTGGAAGAACCAACACAGTTGGATTATATAAGTGATAATGAGAATGGCGTCCAAACAAAAAAGCAGGAAACACAAAAAGATTTTACTAAAGATAGTTCACCATTGGCTCCCAAAGCATTATTGAAGAAGTCATCTCGATTCTTTCCTGCATCGTTCTTTTCTTTTCCTGAAGAGGAGGCTGAGTCCACACCAACATCGGTTTTCCAGGGCCTCATACTATCTGCAAAAAAGCAGTTTCCCAAGCTAGTTCTTGGATTATTGTTAATGGGAGCAGGAGCCGCTGTCTATGCCAATAGAGCAGAGAAAAATGCTCAGCTCCTTCAACCGGCAGATGTCATTATGACCAGTGCTGAAGAACTTTCTTCTAATGCAAAGCCTGTCTTTAGAAAACTCCAGAAAATCCCCAAGAAAATTAAGAAGATTATTGCGTCGTTACCTCATCAAGAGGTGAATGAGGAAGAAGCCTCCCTCTTTGACATGCTCTGGTTATTACTTGCAAGTGTTATATTTGTGCCAATATTTCAAAAAATCCCTGGAGGTAGTCCTGTTCTTGGCTACTTGGCTGCTGGTATCTTGATTGGGCCTTATGGTCTCTCCATCATTCGTAATGTTCATGCGACAAAAGCAATAGCTGAATTTGGAGTTGTTTTCCTTTTATTTAATATTGGCCTGGAGCTCTCTGTTGAAAGGCTTAGTTCTATGAAGAAATATGTTTTCGGATTAGGTTCTGCGCAGGTTTTGGCAACTGCTGGAGTTATTGGCTTGGTGGCTCATTATATCTGTGGCCTACCTGGCCCTGCTGCTATAGTTATCGGGAATGGCCTGGCTTTATCATCCACCGCCGTTGTTCTGCAGGTGTTGCAGGAAAGAGGCGAGAGCACATCACGACATGGGCGAGCTACATTTTCTGTTTTACTTTTTCAGGATTTGGCTGTCGTAGTCTTACTGATTCTCATACCTCTTATTTCACCTAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCCATTGCTGAAGCTCTTGGACTGGCTGCTGTTAAGGCAGCAGTTGCCATTACTGCCATAATTGCAGGTGGACGATTGCTCCTTCGGCCAATATACAAGCAAGTCGCAGAAAATCAAAATGCTGAAATATTCTCAGCCAATACACTTCTTGTTATTCTTGGGACCAGTCTTTTGACCGCCAGGGCAGGACTTTCCATGGCATTGGGAGCATTTTTAGCTGGTTTACTACTGGCAGAAACTGAATTTTCCTTACAGGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTTTTGGGGCTCTTCTTTATGACGGTTGGAATGTCAATCGATCCAAAACTTTTTGTTTCAAACTTCCCAGTCGTCACGGGGACATTGGCACTCTTAATATGCGGCAAGACTCTCTTAGTTTCTTTGATGGGTAGAATCTTTGGGATTTCCGTCATTTCTGCTTTAAGAGCTGGACTTCTTCTTGCTCCTGGTGGAGAATTTGCATTTGTGGCTTTTGGAGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGCTATCTTCTTTGTTGTTTCTTGTTGTGGGCATTTCAATGGCCATCACTCCATGGCTAGCTGCAGGAGGCCAGCTGATTGCTTCCCGTTTCGAGCAGAATGATGTTAGAAGTTTATTACCTGTAGAAAGTGAGACAGATGATCTGCAAGATCATATCATTATTTGTGGATTTGGACGAGTTGGCCAGATCATTGCACAACTTCTTTCCGAGCGACTTATTCCATTTGTCGCACTAGATGTGAGAAGTGAAAGAGTGGCAGTTGGGCGAGCACTCGATCTCCCTGTGTACTTTGGAGATGCTGGCAGTCGAGAGGTAGTCCTTCATAAGATCGGGGCTGAAAGGGCATGTGCTGCAGCTATTACTCTAGATACGCCTGGAGCAAATTATAGAACAGTTTGGGCTCTGAGTAAGTACTTCCCAAATGTGAAGACTTTTGTTCGCGCCCATGACGTTGATCATGGAGTGAATTTAGAGAAGGCCGGAGCTACTGCGGTGGTCCCAGAGACCTTGGAGCCAAGTCTTCAACTAGCAGCTGCTGTGCTTGCTCAGGCTAAACTTCCGGCATCAGAGATTTCAGCGACTATAAATGAATTCAGATGCCGACATCTAGCTGAGCTTTCAGAGCTGTGTGAAGCAAGTGGAAGTTCTCTTGGTTATGGATTTACAAGAATTATGAGCAAAACCAAATCTCAATCTCCAGATGCATTAGATTTAGATGATGCCCAAGTCTCTGAAGGGACACTGGCAGTTGAGATTTTACTGGACTCTGCACTCACTGCAGATGATCCATTCCTCAAATATCTTGTTTATCTCCGGCTTGTAGATACATTGTCTTAA 3654 0.4223 MSIDIGCSLPQSRILHGGAGTSYGQKYVGQVGCFDFRRRGFGCGLLGKSVLRSRFSVENKASCVSALNDSGGEFKVLNTKRSVSCKNEKLLMGSRKIWLKCQGNDSLAYVNGNGRNVDYVEGSGEDVGVELDVLGEEEGGKAEREIGVEENNVDELKELLQKALKELEVAQLNSTMFEEKVKKISETAIFLHDEAARSLNDVNSTLDSIQKVANEEHIAKDAVQNATMALSLAEAKLQVAIESLEAAKEVHESSNESDGDKDLTEKESTLFVAQEDIKKCQDNLTNCEVELRHLQNKKEELQKEVSKLQEISEKAQLDAVKAEEDVTNIMLLAEQAVAFELEATQRVNDAEIALQRADKSFQNLNADAVETIQVEDVVLVSEENMVESYSDDVTVGSDKDLATSDDASLLAKLPPETQPEKTGQILEEPTQLDYISDNENGVQTKKQETQKDFTKDSSPLAPKALLKKSSRFFPASFFSFPEEEAESTPTSVFQGLILSAKKQFPKLVLGLLLMGAGAAVYANRAEKNAQLLQPADVIMTSAEELSSNAKPVFRKLQKIPKKIKKIIASLPHQEVNEEEASLFDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRNVHATKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATAGVIGLVAHYICGLPGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLFVSNFPVVTGTLALLICGKTLLVSLMGRIFGISVISALRAGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMAITPWLAAGGQLIASRFEQNDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSERVAVGRALDLPVYFGDAGSREVVLHKIGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGVNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPASEISATINEFRCRHLAELSELCEASGSSLGYGFTRIMSKTKSQSPDALDLDDAQVSEGTLAVEILLDSALTADDPFLKYLVYLRLVDTLS 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02111 1217 Pfam TrkA-N domain 991 1105 IPR003148 GO:0006813
Mepo3g02111 1217 Coils Coil 347 367 - -
Mepo3g02111 1217 Coils Coil 230 250 - -
Mepo3g02111 1217 ProSiteProfiles RCK N-terminal domain profile. 990 1113 IPR003148 GO:0006813
Mepo3g02111 1217 Gene3D - 986 1151 - -
Mepo3g02111 1217 MobiDBLite consensus disorder prediction 438 458 - -
Mepo3g02111 1217 MobiDBLite consensus disorder prediction 412 431 - -
Mepo3g02111 1217 Pfam Sodium/hydrogen exchanger family 588 958 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Mepo3g02111 1217 FunFam K(+) efflux antiporter 2 chloroplastic 578 964 - -
Mepo3g02111 1217 FunFam K(+) efflux antiporter 2 chloroplastic 986 1151 - -
Mepo3g02111 1217 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 987 1127 IPR036291 -
Mepo3g02111 1217 Gene3D - 578 966 IPR038770 -
Mepo3g02111 1217 CDD UDM1_RNF168_RNF169-like 298 355 - -
Mepo3g02111 1217 Coils Coil 277 325 - -
Mepo3g02111 1217 Coils Coil 146 173 - -
Mepo3g02111 1217 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 188 1172 - -
Mepo3g02111 1217 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 589 869 IPR004771 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02111 Mepo-Chr3 30540029 30557205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02111 3 1189 Inorganic Solute Cotransporters AT4G00630 66.093 0.0 1394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02111 K03455 - gmx:100818163 1704.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02111 3 30540029 30557205 Mepo3g02111 3 30540029 30557205 ECH
Mepo3g02111 3 30540029 30557205 Mepo1g03707 1 43208050 43216573 PCT