Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02098 ATGCAGAACGAAGAAGGTCAAATCACCGAGCTCTACATTCCCAGAAAATGTTCTGCTACAAATCGATTGATAACTGCCAAGGATCACGCTTCAGTTCAGATTAACGTTGGTCATTTGGATGAGAGCGGTGTTTACAATGGTCAATTTTCCACTTTTGCCCTCTGTGGCTTCACTCGCGCACAGGGAGATGCTGACAGTGGAATTGATCGCTTGTGGCAGAAAAAGAAAGCTGAAATTAAGCAATAG 246 0.439 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDESGVYNGQFSTFALCGFTRAQGDADSGIDRLWQKKKAEIKQ 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02098 81 FunFam 40S ribosomal protein S21 1 81 - -
Mepo3g02098 81 Gene3D - 1 80 IPR038579 -
Mepo3g02098 81 PIRSF RPS21e 1 81 IPR001931 GO:0003735|GO:0005840|GO:0006412
Mepo3g02098 81 Pfam Ribosomal protein S21e 1 76 IPR001931 GO:0003735|GO:0005840|GO:0006412
Mepo3g02098 81 PANTHER 40S RIBOSOMAL PROTEIN S21 1 80 IPR001931 GO:0003735|GO:0005840|GO:0006412
Mepo3g02098 81 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02098 Mepo-Chr3 30442729 30443689 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02098 1 81 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 83.951 1.04e-51 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02098 K02971 - cave:132184721 157.147