Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02090 ATGGGTGTTGGTGGTAATTTCTGGGAGTTGTTGAAGCCCTATTCACGCAATGAAGGTTTTGATTTCTTGAGAAACAAGCGAGTTGCTATTGATTTATCGTTTTGGATTGTTCAGCATAACAATGCTATCAAAACCCCTGTCAAGAAACCTCACCTCAGACTCACTTTTTTTCGGACGGTTAATCTCTTTTCTAAGTTTGGAGCATTTCCGGTGTTCATTGTTGATGGGACTCCATCGCCGTTGAAATCACAGGCCAGGATTGCCAGATTTTTCCGATCTTCTGGAATTGAGTCGACTAGCTTGCCTGTTGCTGCTGAAGGTGTTTCAGCTGGGAGGAACAGTTCATTTTCAAGATGTGTTCAAGAGTGTGTGGAACTTGCTAAGCTACTTGGGATTCCTGTACTGAAGGCTAGAGGAGAAGCGGAAGCACTATGTGCCCAATTAAATAGTGAAGGTCATGTAGATGCATGCATCACACCTGACAGTGATGCATTCCTCTTTGGGGCGAAATGCATTATAAAATCTTTCTCTCCCAATTCAAAAGAACCGTTTGAATGCTACAATATGTCAGATATTGAAGCTGGGCTTGGATTGAAGAGGAAACACCTAATAGCTATCTCTCTTTTGGTTGGAAATGATCACGATTTGAGTGGTGTTCAAGGGATCGGAATTGATAGTGCTCTTCGTTTTGTTCAAGCTTTTAGTGAAGATGATATATTGAATAGATTACATGAGATAGGGAAAGGGAATGCTTTTCAAGTTCCGATCGACATTATAGCCGAGGAAAATATGGATATTGATGGGAACTCCCCAAATACAAAACAAACTCACTGCTCATTCTGTGGGCATCCAGGCAACAAAAGAGATCATATGAAGTTTTCATGTGAATTTTGTGTCGTGGATGACAATGAAGGTTGCTTGAAAAAACCAGAGGGTTTTAAATGTGATTGCAACTCTTGTTGTATGAATAGGAAACATAAGGAGCAGAAAAAGATGGAAAATTGGCACACAAAAATTCGTGACAAGATTGCAAAGGAGCCAAATTTTCCAAAGGATGAAATCATTGATATGTATTTGTGCAATGACAATGGTTACTTTTCCGCGAATGATGGTCCTCAGATCTCCTGGGAAAGACCGAATATGGACCTTTTGGTTGATTTTTTAAACTTCCATCAGAACTGGGATCCATCATACATTCGGCGGATAATGTTTCCTATGTTGTCAACCATCTTCTTGAGGGAAATGGCTACAACTCCAACCGATAGTTTGCTATTTGGACAGTTTGAGTTTGATTCTTTAAAACGTGTGAAGACGAGATACGGATATCAGTTTTACGTTGTCAAGTGGAAACGTGCAATGGGAAATATTGCCTCTAGAACTCCGGCAAATAAATCTGACATGCAAGAAGATGTTATAGAGCTTGATGTTGATGAAACAGTGGATCTACTTGACGATTGTGATTTTCCCCAGATTTGTGAAGAAGATGGATGTAGTTTTCTGTTGACAGATGAAAATATGGACCTTGTTGGGGCTGCTTACCCAGAAGAAGTGAAAAGGTTCCGGCAGGAACAGGAATTGAAGGACGCGAAACGAAAAAAGAATCCAAGCTCAATATCTCAAGAAAATGAGAAGTCCTCAACATCACCAAACTCAAAAGGTGTCCAGCTAAATATTACAGAGTTCTTCCCAACAATGAAAAGTAAACATAATCCAAAACATGGAGAAGAGTCATCATCATCCAAGAAAAATGATAGCCAAGACAGCGGAGGCTCAAAACCAAAGAGGAAATCGTCAAGTCCTAATATTCCAAAATCTGTTAGGCGTCGCCTTTTGTTTGACTAG 1842 0.4012 MGVGGNFWELLKPYSRNEGFDFLRNKRVAIDLSFWIVQHNNAIKTPVKKPHLRLTFFRTVNLFSKFGAFPVFIVDGTPSPLKSQARIARFFRSSGIESTSLPVAAEGVSAGRNSSFSRCVQECVELAKLLGIPVLKARGEAEALCAQLNSEGHVDACITPDSDAFLFGAKCIIKSFSPNSKEPFECYNMSDIEAGLGLKRKHLIAISLLVGNDHDLSGVQGIGIDSALRFVQAFSEDDILNRLHEIGKGNAFQVPIDIIAEENMDIDGNSPNTKQTHCSFCGHPGNKRDHMKFSCEFCVVDDNEGCLKKPEGFKCDCNSCCMNRKHKEQKKMENWHTKIRDKIAKEPNFPKDEIIDMYLCNDNGYFSANDGPQISWERPNMDLLVDFLNFHQNWDPSYIRRIMFPMLSTIFLREMATTPTDSLLFGQFEFDSLKRVKTRYGYQFYVVKWKRAMGNIASRTPANKSDMQEDVIELDVDETVDLLDDCDFPQICEEDGCSFLLTDENMDLVGAAYPEEVKRFRQEQELKDAKRKKNPSSISQENEKSSTSPNSKGVQLNITEFFPTMKSKHNPKHGEESSSSKKNDSQDSGGSKPKRKSSSPNIPKSVRRRLLFD 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02090 613 MobiDBLite consensus disorder prediction 524 538 - -
Mepo3g02090 613 MobiDBLite consensus disorder prediction 566 591 - -
Mepo3g02090 613 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 551 IPR006084 -
Mepo3g02090 613 FunFam Flap endonuclease GEN-like 1 198 255 - -
Mepo3g02090 613 Gene3D - 198 261 - -
Mepo3g02090 613 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 198 414 IPR036279 -
Mepo3g02090 613 CDD PIN_GEN1 2 202 - -
Mepo3g02090 613 Gene3D - 3 197 - -
Mepo3g02090 613 Pfam XPG N-terminal domain 1 89 IPR006085 GO:0004518
Mepo3g02090 613 SMART xpgineu 128 198 IPR006086 GO:0004518
Mepo3g02090 613 SMART xpgn3 1 96 IPR006085 GO:0004518
Mepo3g02090 613 MobiDBLite consensus disorder prediction 524 613 - -
Mepo3g02090 613 MobiDBLite consensus disorder prediction 539 564 - -
Mepo3g02090 613 Pfam XPG I-region 131 213 IPR006086 GO:0004518
Mepo3g02090 613 SUPERFAMILY PIN domain-like 6 213 IPR029060 -
Mepo3g02090 613 FunFam Flap endonuclease GEN-like 1 2 197 - -
Mepo3g02090 613 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 25 39 IPR006084 -
Mepo3g02090 613 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 148 168 IPR006084 -
Mepo3g02090 613 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 203 218 IPR006084 -
Mepo3g02090 613 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 127 144 IPR006084 -
Mepo3g02090 613 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 70 89 IPR006084 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02090 16 272 Core DNA Replication Machinery Family AT5G26680 26.962 2.19e-16 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02090 K15338 - gmx:100791251 895.19