Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02087 ATGTTGGGTTCAGGGACAAATTTGGTTACAACTGTTATTGGATTTGGCATGAGTGCCACTTTCATTGTGTTTGTCTGTACTAGAATAATTTGTGGAAGGCTTAGAGGTGGTGTTGAATCTAGGATGATGTATGAGATTGAATCAAGATATGATATAGAACAGCCAGAACACCATGTTAATGACCCTGGCACTGAACCAGTTTTGATTGAAGCAATCCCTACTTTAAAGTTCAATCAAGAGGCTTTCAGTTCCATTGAAGATACACAGTGTGTAATATGTCTGGCAGACTACAAAGAAAGAGAAATACTGCGCATCATGCCCAAATGCGGCCACACTTTTCATCTTTCTTGCATTGATATATGGCTGAGGAAACAATCTACCTGTCCAGTGTGCCGTCTTCCATTGAAAAATTCGTCCGAAACAAAACATGTGAGACCTGTGACATTCACCATGAGCCAACCTCTTGACGAGTCGCACGCATCCGAAAGGAACACAGATATTGAGAGGCACGGTGAAACTAATGCTGTTAACTCAATACAACCAACTTCTGGAGAATCCGAAGCAAGGCAATGA 573 0.4154 MLGSGTNLVTTVIGFGMSATFIVFVCTRIICGRLRGGVESRMMYEIESRYDIEQPEHHVNDPGTEPVLIEAIPTLKFNQEAFSSIEDTQCVICLADYKEREILRIMPKCGHTFHLSCIDIWLRKQSTCPVCRLPLKNSSETKHVRPVTFTMSQPLDESHASERNTDIERHGETNAVNSIQPTSGESEARQ 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02087 190 Pfam Ring finger domain 89 132 IPR001841 -
Mepo3g02087 190 ProSiteProfiles Zinc finger RING-type profile. 90 132 IPR001841 -
Mepo3g02087 190 MobiDBLite consensus disorder prediction 152 190 - -
Mepo3g02087 190 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 49 138 IPR013083 -
Mepo3g02087 190 CDD RING-H2_EL5-like 89 132 - -
Mepo3g02087 190 SMART ring_2 90 131 IPR001841 -
Mepo3g02087 190 MobiDBLite consensus disorder prediction 171 190 - -
Mepo3g02087 190 SUPERFAMILY RING/U-box 79 139 - -
Mepo3g02087 190 PANTHER OS11G0150450 PROTEIN 1 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02087 Mepo-Chr3 30332342 30334410 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02087 4 189 C3H Transcription Factor Family AT1G72220 31.250 3.74e-21 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02087 - - ccaj:109802319 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02087 3 30332342 30334410 Mepo3g02087 3 30332342 30334410 ECH