Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02084 ATGGTGGAAGATGGTGTTGCAGTTGATATACTTTCAACAGAAGATTGGTTGTTACATGCAAAGGAACTTGTTCCTATTGCTCTTGATAAAGCAAAAGAGGTTAAAGGTTTTCCTACTAGATGGAAAATGATCGTTTCTAGATTAGAACAGATTCCATCAATGTTATCAAACTTATCAAGCCATCCATGTTTCTCAAAGAATGCTCTTTGCAAGGAGCAATTGCAGGCTTTGTCGAAGTCACTTGAAGGCGCGATCGAATCAGCTGAATTGTGTGCGAAGGAGAAGTATGAAGGTAAACTTCAGATGCAGAGTGATCTGGATGCATTAATCGGGAAAATGGATTTGAATTTACGAGATTGTGGACTTTTGGTCAAAACTGGTATGCTCGGCGAGGCTACTTTACCGTTAAATGCGTCTTCCGTGTCAGGTTCTGCAACAGAATCTGATGCAGCAGCCCACAACAACATAAGGGAGTTACTTGCGCGCCTTCAGATCGGTCACTTAGAAGCGAAGCACAAAGCTTTGGACAGTGTTGTTGAGGTTATGAAAGAAGATGAAAAGAATGTTTTGGCTGTTTTTAGCAGGAGCAACATTGCTGCACTTGTTCAATTGCTTACCGCAACGTCAACAAGGGTAAGAGAGAAAACGGTTACTGTTATATGCTCGCTAGCCGAATCGGGTAGCTGCGAGGATTGGCTAGTTTCTGAAGGTGTTCTTCCACCTCTTATAAGACTTGTTGAATCAGGAAGTGCTGTAGGTAAAGAAAAGGCTGCAATATCGTTACAAAGGTTATCAATGTCGGCTGAAACATCGCGTGAAATCGTCGGACATGGTGGCGTTTGTCCGTTGGTTGATCTTTGTAGAACTGGTGATTCTGTTTCGCAGGCTGCAGCAGCTTGTACATTGAAGAATATTTCAGCTGTTCCTGAGGTGAGACAGGTTTTGGCTCAAGAAGGGATTGTGAGGGTTATGATCAATTTGTTAACTTGTGGAATGTTGTTAGGTTCCAAAGAATATGCTGCGGAATGTTTGCAGAACCTCACTGCAAGCAATGAGAGTCTAAAAAAAAGTGTTGTATCGGAAGGCGGTGTTAGGAGTCTCTTAGCATATCTTGACGGTCCACTTCCTCAAGAATCTGCAGTCGCGGCGTTAAGGAATTTGGTCGGATCGGTTTCTGAGACAGCTTTGGTTTCGTTAGGATTACTTCCTCGTTTGGTTCACGTGTTGAAATCCGGCTCCCCTGGAGCACAAAATGCCGCTGCATCAGCAATCTGCCGAGTTTGCAGCTCAACCGAGATGAAAAAATTGGTCGGCGAAGCCGGTTGCATTCCTCTCCTTGTTAAGATGCTTGAAGCTAAACAAAACAGTGCTAGAGAAATTGCTGCACAAGCATTAGCAAGCTTGTTAACTGTGTCACATAATAGAAGAGAAGTTAAGAAGGATGATAAAAGTGTGCCAAATTTGGTTCAGTTACTTGATCCTAGTCCTCAAAACAATGCAAAAAAATATGCAGTTACATGCCTTGGATTGATTTCTTCAAGTAAGAAATGTAAGAAGCTAATGATCTCATATGGTGCTATTGGATATTTGAAGAAACTTACTGAGATGGATACTCCAGGAGCTAAAAAGTTACATGAGAGATTGGAAAGAGGGAAATTAAGAAGTTTGTTTGGCAAGAAATAG 1683 0.4201 MVEDGVAVDILSTEDWLLHAKELVPIALDKAKEVKGFPTRWKMIVSRLEQIPSMLSNLSSHPCFSKNALCKEQLQALSKSLEGAIESAELCAKEKYEGKLQMQSDLDALIGKMDLNLRDCGLLVKTGMLGEATLPLNASSVSGSATESDAAAHNNIRELLARLQIGHLEAKHKALDSVVEVMKEDEKNVLAVFSRSNIAALVQLLTATSTRVREKTVTVICSLAESGSCEDWLVSEGVLPPLIRLVESGSAVGKEKAAISLQRLSMSAETSREIVGHGGVCPLVDLCRTGDSVSQAAAACTLKNISAVPEVRQVLAQEGIVRVMINLLTCGMLLGSKEYAAECLQNLTASNESLKKSVVSEGGVRSLLAYLDGPLPQESAVAALRNLVGSVSETALVSLGLLPRLVHVLKSGSPGAQNAAASAICRVCSSTEMKKLVGEAGCIPLLVKMLEAKQNSAREIAAQALASLLTVSHNRREVKKDDKSVPNLVQLLDPSPQNNAKKYAVTCLGLISSSKKCKKLMISYGAIGYLKKLTEMDTPGAKKLHERLERGKLRSLFGKK 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02084 560 Gene3D - 155 252 IPR011989 -
Mepo3g02084 560 SMART arm_5 350 389 IPR000225 GO:0005515
Mepo3g02084 560 SMART arm_5 267 307 IPR000225 GO:0005515
Mepo3g02084 560 SMART arm_5 430 470 IPR000225 GO:0005515
Mepo3g02084 560 SMART arm_5 390 429 IPR000225 GO:0005515
Mepo3g02084 560 SMART arm_5 471 513 IPR000225 GO:0005515
Mepo3g02084 560 SMART arm_5 308 349 IPR000225 GO:0005515
Mepo3g02084 560 SMART arm_5 185 225 IPR000225 GO:0005515
Mepo3g02084 560 Gene3D - 376 548 IPR011989 -
Mepo3g02084 560 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 10 557 - -
Mepo3g02084 560 SUPERFAMILY ARM repeat 156 537 IPR016024 -
Mepo3g02084 560 Gene3D - 253 375 IPR011989 -
Mepo3g02084 560 Pfam Armadillo/beta-catenin-like repeat 272 307 IPR000225 GO:0005515
Mepo3g02084 560 Pfam Armadillo/beta-catenin-like repeat 395 428 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02084 Mepo-Chr3 30299686 30302607 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02084 242 543 U-box Gene Family AT2G23140 21.782 5.00e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02084 - - gmx:100789140 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02084 3 30299686 30302607 Mepo3g02084 3 30299686 30302607 ECH