Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02078 ATGCCTTCTAGTGCAATCTCACAACCTCGTTTATCAACTCCTACTTTGGTTAAATCCATGTTCAACTCATCTGGTCTATCTTTAGCACTTCAAACAAATATAGAAGCACAAGGTGGTGATATGAAGAGATTAATGGCTGAGAATTTTCATCAAACAAACAATGGTTTGAGAAGGAATAGAGAAGAAGAAGAACATGAAAGCTGCAGATCTGGTAGTGATAACATGGATGGTATTTCTGGTGATGATTTTGATGCTGCCGACAATCCACCAAGAAAAAAACGTTATCACCGACACACTCCTCAACAAATTCAAGAACTTGAATCGATGTTTAAAGAGTGTCCTCATCCTGATGAAAAACAAAGACTTGAACTTAGCAAAAGGCTTTGTTTGGAAACAAGACAAGTTAAGTTTTGGTTCCAAAATAGAAGAACACAAATGAAGACTCAATTGGAACGTCATGAGAATTCACTACTTAGGCAAGCAAATGATAAACTAAGAGCTGAAAACATGTCAATAAGAGAAGCAATGAGGAATCCCATGTGTTCAAGTTGTGGAGGACCAGCAATTATTAGTGAAATTTCACTTGAAGAACAACATCTAAGAATTGAGAATACAAGATTAAAAGATGAATTAGACCGAGTTTATACACTCGCCGGCAAGTTTTTAGGCCGTCCAATTACTTCGTTACCAAACTCGAGTTTAGAAATTGGTTTTGTTGGTTTGAACAATAGTTTGCCTTCAACATTGCCTTTAGGTCAAGAATTTGGCATGGTGTCAATGTCGCCACCTTCAATTACAAGAGGAACAAATATGGTAACAAATACCAATAGCAATGGTTTTGATAGATCAATGGAGAGGTCTATGTTTCTTGAACTTGCTTTGGCTGCAATGGATGAGTTAGTGAAGATGGCACAAACTAATGAGCCTCTTTGGATTAGAAATGTTGAAAGTGGAAAAGAAATTTTTAATCATGAGGAATATACAAGGATTATTAGTACTCCTTGTATTGGTTTGAAACCAAATGGTTTTGTTTCTGAGGCTTCTAGAGAAAGTGGTGTTGTTATCATAAACAGCTTGGCTCTTGTTGAAACTTTAATGGATTCAAATCGATGGTCAGAGATGTTCCCTTGTGTGATTGCAAGAAGCTCTACAACTGAAGTGATATCTAGTGGAATAAATGGAACCAGAAATGGTGCTCTACAACTGATGCAAGCTGAACTTCAAGTGCTTTCTCCATTGGTTCCTGTTCGTGAGGTGAGTTTTCTAAGGTTTTGCAAGCAGCATGCAGAAGGGGTATGGGCAGTGGTAGATGTGTCCATAGATACCATCAGAGAAACTTCAGCTGGTGCACCCACTTTTCTTAACTGTAGGAGGCTTCCTTCTGGTTGTGTGGTTCAAGATATGCCAAATGGTTACTCTAAGGTGACATGGGTGGAGCATGCAGAATATGAAGAAAGCCAAGTTCACCAGCTCTATAGACCCTTGTTAAGCTTAGGCATGGGTTTTGGCGCACAACGTTGGGTTGCAACCCTCCAACGCCAATGCGAATGTCTAGCCATCTTAATGTCATCATCACTCCCCTCTAGAGAACACTCAGCAATAAGTGTGGGAGGAAGGCGTAGCATGCTAAAGCTAGCGCATCGAATGACAAACAACTTTTGTGCCGGAGTTTGTGCATCAACGGTGCACAAATGGAACAAATTGAATGCAGGGAACGTGGGTGAGGATGTTAGGGTAATGACAAGGAAGAGTGTGGATGATCCAGGTGAGCCACCGGGGATTGTGCTTAGTGCAGCAACCTCTGTTTGGCTACCCGCTTCACCACAAAAAGTATTTGATTTCCTCCGCAACGAGAAGCTTAGAAGTGAATGGGACATACTCTCCAACGGTGGTCCAATGCAAGAGATGGCTCACATTGCCAAAGGACATGACCATGGCAACTGTGTCTCCCTCCTACGAGCTAGCACTATTAATTCAAGTCAAAGTAGCATGTTAATTCTACAAGAAACAAGCACAGACGCATCGGGGTCGCTTGTTGTGTATGCTCCGGTGGATATTCCTGCAATGCATGTAGTAATGAACGGCGGCGATTCAGCTTATGTTGCGCTTCTTCCGTCGGGTTTTGCCGTGTTACCAGATGAACATAGCAATGGGACTGGTAATCACGATGATGCGTCACAGCCGAGAGTGAGTGGATCACTTTTGACGGTAGCATTTCAGATACTTGTGAATAGCCTTCCGACGGCAAAGCTCACGGTGGAATCAGTGGAAACGGTGAACAATCTCATTTCATGTACTATTCAAAAGATAAAAGTAGCACTTCAATGTGAGAGTTAA 2337 0.4155 MPSSAISQPRLSTPTLVKSMFNSSGLSLALQTNIEAQGGDMKRLMAENFHQTNNGLRRNREEEEHESCRSGSDNMDGISGDDFDAADNPPRKKRYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQANDKLRAENMSIREAMRNPMCSSCGGPAIISEISLEEQHLRIENTRLKDELDRVYTLAGKFLGRPITSLPNSSLEIGFVGLNNSLPSTLPLGQEFGMVSMSPPSITRGTNMVTNTNSNGFDRSMERSMFLELALAAMDELVKMAQTNEPLWIRNVESGKEIFNHEEYTRIISTPCIGLKPNGFVSEASRESGVVIINSLALVETLMDSNRWSEMFPCVIARSSTTEVISSGINGTRNGALQLMQAELQVLSPLVPVREVSFLRFCKQHAEGVWAVVDVSIDTIRETSAGAPTFLNCRRLPSGCVVQDMPNGYSKVTWVEHAEYEESQVHQLYRPLLSLGMGFGAQRWVATLQRQCECLAILMSSSLPSREHSAISVGGRRSMLKLAHRMTNNFCAGVCASTVHKWNKLNAGNVGEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPASPQKVFDFLRNEKLRSEWDILSNGGPMQEMAHIAKGHDHGNCVSLLRASTINSSQSSMLILQETSTDASGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAVLPDEHSNGTGNHDDASQPRVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTIQKIKVALQCES 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02078 778 Pfam Homeodomain 92 147 IPR001356 GO:0003677
Mepo3g02078 778 Coils Coil 158 178 - -
Mepo3g02078 778 CDD START_ArGLABRA2_like 286 516 - -
Mepo3g02078 778 ProSiteProfiles 'Homeobox' domain profile. 89 149 IPR001356 GO:0003677
Mepo3g02078 778 MobiDBLite consensus disorder prediction 54 71 - -
Mepo3g02078 778 ProSitePatterns 'Homeobox' domain signature. 124 147 IPR017970 GO:0000981|GO:0006355
Mepo3g02078 778 MobiDBLite consensus disorder prediction 52 99 - -
Mepo3g02078 778 Gene3D - 80 165 - -
Mepo3g02078 778 CDD homeodomain 91 149 IPR001356 GO:0003677
Mepo3g02078 778 SMART START_1 291 517 IPR002913 GO:0008289
Mepo3g02078 778 SUPERFAMILY Bet v1-like 283 517 - -
Mepo3g02078 778 SUPERFAMILY Bet v1-like 539 762 - -
Mepo3g02078 778 ProSiteProfiles START domain profile. 282 520 IPR002913 GO:0008289
Mepo3g02078 778 Pfam START domain 291 517 IPR002913 GO:0008289
Mepo3g02078 778 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 88 775 IPR042160 -
Mepo3g02078 778 SMART HOX_1 90 153 IPR001356 GO:0003677
Mepo3g02078 778 FunFam Homeobox-leucine zipper protein GLABRA 2 291 516 - -
Mepo3g02078 778 SUPERFAMILY Homeodomain-like 75 149 IPR009057 -
Mepo3g02078 778 FunFam Homeobox-leucine zipper protein HDG1 79 165 - -
Mepo3g02078 778 Coils Coil 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02078 Mepo-Chr3 30205822 30212829 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02078 1 778 Homeobox Transcription Factor Family AT3G61150 64.464 0.0 1009
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mepo3g02078 START 1.8e-55 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02078 K09338 - gmx:100787537 1241.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02078 3 30205822 30212829 Mepo3g02078 3 30205822 30212829 ECH