Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02077 ATGAATATGATGAGAAGGTTGAAAAGCATTGCTTCTGGAAGAACCTCAGTTTCATCAGATCCTGGAGGGGATTCTACAACAAAAAGAGCCAAATTTGATCAAGAAACTGAAGGAAAGGAAAATGAAGAAACAAACCGTGTTGAGAGGGGCGGAAATAACCAGGATAAGTATGTAGATGCCTCACAAGAAGAGACATCTAGTTCTTGTAATTCTAATGTTTCTGCGGTGGCTAAAACCGAGAAGTCAGGTTTTGATCAGCTTCCAAAAGAATTACACGAAATGAAAATTAAAGATGATAAAAGCAAAAAAAACAACAATGAAAAGGATATGGAGGCAACTGTTGTGAACGGAAATGGAACGGAAACTGGTCAAGTAATTACAACTTCTATTGGTGGTCGAGATGGACAACCAAAGAGGATAATCTCATACATGGCAGAACGTGTCGTTGGTACCGGTTCTTTTGGCGTTGTTTATCAGGCTAAGTGCGTTGAAACAGGTGAATCTGTTGCAATAAAGAAAGTCTTACAAGACAAGAGATATAAAAACAGGGAACTCCAAGTTATGCGTATGCTTGAACATACTAATGTTCTTAAACTAAAGCACTGTTTCTACTCGACGGCTGAAAAAGATGAGGTGTACCTTAACTTAGTTTTGGAGTTTGTACCTGAAACTGTCTACAGAGTTTCGAAGCACTATGTCAGGATGCACCAACACATGCCTATAATTTATGTGCAACTATATACATATCAGATATGCCGCGGTTTAAATTATTTGCATCATGTGGTTGGAGTCTGTCACCGTGACATCAAACCTCAGAATCTATTGGTTAATCCTGCGTGTCATCAGTTAAAGATATGTGATTTTGGGAGTGCAAAAATGTTGTTGCCCGGTGAACCCAACATATCGTACATATGCTCGCGGTATTATAGAGCTCCTGAACTTATATTTGGTGCAACGGAATACACAACCGCTATTGATGTTTGGTCTGCTGGCTGTGTTTTGGCTGAGCTTCTTCTAGGACAGCCATTGTTTCCTGGAGAGAGTGGGGTTGATCAGTTGGTAGAGATCATTAAGATCTTGGGAACACCTACCAGAGAAGAAATAAAGTGCATGAATCCAAATTACAGTGAATTTAAGTTTCCACAGATTAAAGCTCACCCATGGCACAAGATCTTTCACAAGAGCATGCCTTCTGAAGCAGTGGATCTTGTGTCGAGGATGCTTCAATATTCTCCAAATCTACGCTGCACAGCTTTGGATGCATGTGCACATTCCTTCTTTGATGACCTTCGGGACCCAAACGCCCGCTTACCGAATGGACAAGAACTTCCTCCTTTGTTTGATTTCACAGCCCAAGAGTTAGCAGGCGCACCTGATGAGTTGCGTCGACGTCTAATTCCCGAGCATGCAAGGAGTTGA 1419 0.413 MNMMRRLKSIASGRTSVSSDPGGDSTTKRAKFDQETEGKENEETNRVERGGNNQDKYVDASQEETSSSCNSNVSAVAKTEKSGFDQLPKELHEMKIKDDKSKKNNNEKDMEATVVNGNGTETGQVITTSIGGRDGQPKRIISYMAERVVGTGSFGVVYQAKCVETGESVAIKKVLQDKRYKNRELQVMRMLEHTNVLKLKHCFYSTAEKDEVYLNLVLEFVPETVYRVSKHYVRMHQHMPIIYVQLYTYQICRGLNYLHHVVGVCHRDIKPQNLLVNPACHQLKICDFGSAKMLLPGEPNISYICSRYYRAPELIFGATEYTTAIDVWSAGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYSEFKFPQIKAHPWHKIFHKSMPSEAVDLVSRMLQYSPNLRCTALDACAHSFFDDLRDPNARLPNGQELPPLFDFTAQELAGAPDELRRRLIPEHARS 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02077 472 FunFam Glycogen synthase kinase-3 beta 127 222 - -
Mepo3g02077 472 MobiDBLite consensus disorder prediction 26 53 - -
Mepo3g02077 472 Gene3D Phosphorylase Kinase; domain 1 126 222 - -
Mepo3g02077 472 SUPERFAMILY Protein kinase-like (PK-like) 142 452 IPR011009 -
Mepo3g02077 472 CDD STKc_GSK3 141 430 IPR039192 -
Mepo3g02077 472 Pfam Protein kinase domain 143 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02077 472 MobiDBLite consensus disorder prediction 9 25 - -
Mepo3g02077 472 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 104 471 - -
Mepo3g02077 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Mepo3g02077 472 FunFam Shaggy-related protein kinase kappa 223 471 - -
Mepo3g02077 472 MobiDBLite consensus disorder prediction 1 74 - -
Mepo3g02077 472 SMART serkin_6 143 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02077 472 ProSiteProfiles Protein kinase domain profile. 143 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g02077 472 ProSitePatterns Protein kinases ATP-binding region signature. 149 173 IPR017441 GO:0005524
Mepo3g02077 472 MobiDBLite consensus disorder prediction 55 74 - -
Mepo3g02077 472 Gene3D Transferase(Phosphotransferase) domain 1 223 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02077 Mepo-Chr3 30186184 30190612 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02077 149 454 MAP Kinase Gene Family AT3G45640 34.603 1.04e-54 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Mepo3g02077 Pkinase 2.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02077 K00924 - gmx:100786458 836.254