Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02075 ATGGACACTTCAAATCCAACTCTTGATTCCACCGCCGGCGACACCGAACCATTCCTCCGCCGCACCCTCCGCCGCACCATCCACCACACACCACCACTCCGCACCGCCACTCATTTCTTCCGTCGCGCTAGCTCACACCGTATGATGCTCCGCGAACCATCAGTCCGTGTCCGAGAAAGAGCAGCAACGGAGGTAGAAAACCGGCAGAGAGAGTGGGCTTATTCAAAACCCGTTGTAGCACTTGATATAGCGTGGAACTTGTCGTTTCTTGTTGTTAGTGTTGTCGTTTTGGGGTTGAGTAGTGAAGAGGAACCGTGTGTGCCTCTTAGGGTGTGGATTTTGGGTTACTTGTTGCAGGGGTTGGTTCATTCGGTGTGTGTTGTTTTGGAATTCAGAAGAAGGAGAAGGGATAATCATTTGGAAGATGATGATGATTCTGTTTTGGAGAGTGGTTTACGGTGGCGTTTTAGTTCTGAGAGTGAATCTGATTTTGCTTCTCAGCATGAGAGTGAGGAAAATAGTATCATCAAGCACATAGAGTCTGCAAATACCATTCTATCATTCATATGGTGGATTCTTGGGTTCTACTGGGTAACTGTAGGTGGTCAGAGTTTGACAAAGGATTCACCTCAGCTTTACTGGCTATGTATTACATTTCTTGCTTTTGATGTTGTCATTGTAGTGATTTGTGTTGCTGTTGCATGTCTCATTGGAATTGCTGTTTGCTGTTGTCTTCCATGCATACTTGCTATTTTGTATGCAGTGGCTGATCAGGGAGCAACCATGGAAGAGATTGATCAGTTGCCAAAATATAAGTTTAGAATGATAAAGGAATCTAAGGAAGAAGGGGATGCCCAAGAATCATCCAGAGGAGTGATGACGGAATGTGACAGTGATACAGCTTCTGAGCATGTTATTGCCTTAGAAGATGCAGAATGCTGTATCTGCCTTTCTGCCTATGATGATGGGGCTGAACTTAGAGAACTTCCTTGCAACCACCATTTTCATTATACATGCATAGACAAATGGCTGCTAATCTGTGCTACCTGCCCTCTCTGCAAATTTGACATTTTGAGCACTGATAACCCCAATCAAGAAGTTTGA 1104 0.4493 MDTSNPTLDSTAGDTEPFLRRTLRRTIHHTPPLRTATHFFRRASSHRMMLREPSVRVRERAATEVENRQREWAYSKPVVALDIAWNLSFLVVSVVVLGLSSEEEPCVPLRVWILGYLLQGLVHSVCVVLEFRRRRRDNHLEDDDDSVLESGLRWRFSSESESDFASQHESEENSIIKHIESANTILSFIWWILGFYWVTVGGQSLTKDSPQLYWLCITFLAFDVVIVVICVAVACLIGIAVCCCLPCILAILYAVADQGATMEEIDQLPKYKFRMIKESKEEGDAQESSRGVMTECDSDTASEHVIALEDAECCICLSAYDDGAELRELPCNHHFHYTCIDKWLLICATCPLCKFDILSTDNPNQEV 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02075 367 ProSiteProfiles Zinc finger RING-type profile. 313 354 IPR001841 -
Mepo3g02075 367 SMART ring_2 313 353 IPR001841 -
Mepo3g02075 367 Pfam Ring finger domain 312 354 IPR001841 -
Mepo3g02075 367 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 290 360 IPR013083 -
Mepo3g02075 367 PANTHER TARGET OF ERK KINASE MPK-1 43 360 - -
Mepo3g02075 367 SUPERFAMILY RING/U-box 303 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02075 Mepo-Chr3 30176885 30180718 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02075 4 361 C3H Transcription Factor Family AT1G68070 46.409 2.16e-104 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02075 - - tpra:123891576 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02075 3 30176885 30180718 Mepo3g02075 3 30176885 30180718 ECH