Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02070 ATGGATAATAACTATGGTTATCCATATAGGTATCCAAACCCTTATATGTACCCCCCTAACCCTAACCCTCATCCTCACCCTCACCCTCATCCACCATATCCACCTCAAGATCCATATGCACATTCTCACACTCATCATGCTCCTCCTTATCCATATCCTTACATTTCTTCACATTCCTTCAACTATTCTTCCTATCCTATATCACCACCACCACCACCACCACCATCATCATCATCCAATTCTACTGCCCCATTTGATTATGCATACCCTCCACCTGCTCCTCTTCATCAATTAGTACCCTCAGCCCCACCCTCTTATCCTTATCATGTTCCTCCAGGGAGTCATCATAGTCCTCCTCAACATTCCCTTTCACACTCACACCATGCTAGCTTATTACAACAGGGATCATCCTCTCAGTATTATTATTATCAACAAAATACTCCTCGTGAAGACCGTCCTGATCTTCATTCACGTCATAATAGCTTCTCTGGTCCTTACTGGCCAGATACATCAAGTTCAACAGCAGGTGGTGGAGTATCACAAACTAGCGGTGGTGATAATTCTAGGCCGTCTGCTTATCCGCGTTTGGATGATCTAATGAACAATGTTAGGTTGTCTGGTAACCAGCCAACTCCTCCTGCATCGCCTCCAGCTCCTGCAGCTGCAGGTCAACCTTTTATGCATTCGATTTCGGTATCAAAGTTGCAACAAAAGAAGGAAGATTTTTATGGACATTCTAATAACTCCTTCTCCGGTTGGGGGTCGTCGTACCCGAGTCGGGTGAACTCAGGTAGACTTTCGGATTATTCTGGCTCGTTTAACGGATCAATGCATAGTCAGAGCATGCAGATTGTTCCGGTTCAGAATAAAGGGTCCTTGAGATTTTTGCTCCTTCATGGAAATTTAGATATATGGGTTCATGAAGCCAAAAATCTTCCAAATATGGACATGTTCCACAAAACGCTGGGGGATATGTTCGGTAAATTACCTGGTAGTGTGAGCAATAAAATTGAAGGAACAATGAATAAGAAGATTACTAGTGATCCTTATGTTTCGATTTCAGTGGCAAATGCGGTAATTGGGAGGACTTTTGTGATTAGCAATTCTGAAAACCCTGTTTGGAGTCAACACTTCTATGTTCCTGTTGCACATAACGCTGCTGAAGTGCACTTTTTGGTTAAAGACAGTGATGTTGTGGGTTCACAGCTCATTGGTATTGTGGCGATTCCAGTGGAACACATATACTCAGGGGCAATAGTTGAAGGAACTTACCCTATACTGAATAATAATGGGAAGCCTTATAAGCAAGGTGCTGTGCTGAGCCTATCCATTCAGTACATCCCAATGGAGCAATTGAGCTTTTATCATCAAGGAGTTGGAGCAGGGCCTGAATATATTGGTGTTCCTGCCACTTATTTTCCTTTGAGGAAAGGGGGAAATGTTACTCTATATCAAGATGCTCATGTTCCAGATGGTAGCCTCCCTAATGTGTTGCTTGATAGTGGGATGTTTTATGTGCATGGAAAGTGTTGGCATGACATATTTGATGCCATAAGTCAAGCTCGCCGCTTGATATATATTACAGGATGGTCGGTGTGGCACAAAGTTAGGTTGATAAGGGATGCCGGCTACAGTTCCGATTATACCTTAGGTGATCTTCTGAAGACAAAGTCACAAGAAGGAGTAAGAGTGCTTCTCCTTATTTGGGATGATCCTACATCAAGAAGTATTTTGGGTTATAAAACTGATGGTGTGATGGCAACTCATGATGAGGAAACTAGGCGGTTTTTCAAGCACTCATCAGTTCATGTGCTGCTTTGTCCTCGTAGTGCTGGAAAACGACATAGCTGGGTCAAGCAAAGGGAAGTTGGAACTATATATACACATCATCAGAAAACTGTAATTGTGGATGCTGATGCTGGAAATAACAGAAGAAAAATTGTAGCATTTGTTGGTGGACTTGATTTATGTGATGGCCGATACGATACTCCCCAGCATCCTCTCTTTAAGACATTACAAACAATACATAAGGATGATTACCACAACCCAACTTTCACGGGTAACACTGGTGGTTGTCCAAGGGAGCCATGGCATGATTTGCATACTAAAATTGATGGTCCGGCAGCTTATGATGTCTTAACTAACTTTGAGGAGCGCTGGTTAAAAGCTTCAAAACCACAGGGGATAAAGAAGTTGAAAATTTCATATGATGATGCTTTACTCAGACTGGAAAGAATTCCAGATGTTATTGGCATTAATGACACTCCTAGTGGTGAGAATGATCCTGAATCATGGCATGTTCAGATATTTCGCTCAATTGATTCAAGTTCTGTTAAGGGATTTCCAAAAGATCCAAGAGAGGCGACTGGCAAGAACCTTGTATGTGGGAAGAACGTGCTGATTGACATGAGCATACATACAGCATACGTGAAGGCTATTCGTGCTGCACAGCATTACATTTATATAGAGAATCAATATTTCATCGGCTCTTCTTACAATTGGAGTCAACATAAAGACCTTGGCGCTAATAATTTAATTCCAATGGAAATTGCTCTAAAGATTGCGGAAAAGATTAAAGCAAATGAGAGGTTTGCAGTTTATATAGTAATTCCAATGTGGCCAGAAGGTGTTCCAACGGGTGCTGCCACACAAAGGATACTATTCTGGCAAAACAAAACAATGCAAATGATGTATGAGACAATTTCAAAGGCTTTGGTTGAAGCTGGGCTTGAAGCAGCATTCTCTGTGCAAGACTATTTGAATTTTTTCTGTCTTGGTAATCGAGAGGCCATAAATATCTACGAAAATATCAGTGTGTCGGGAAATCCTCCCCCAGCAAATAGTCCACAAGCAAATAGTCGAAATAGTCGACGTTTCATGATATATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATAGTGGGCTCTGCGAACATTAACCAACGCTCTATGGAAGGAACAAGGGACAGTGAGATTGCAATGGGAGCATACCAACCTCATCATACCTGGGCAAGAAAACATTCCAATCCACTTGGACAAATCCATGGATATAGGATGTCACTTTGGGCAGAACATACTGGAACAATTGATGACTGCTTCTTGCAACCTGAGAGCCTTGAATGCGTGCGAAAGGTTAGAGCAATTGGTGAAATGAACTGGAAACAATTTGCAGCAAATGATGTGACTGAGATGAGAGGGCATCTACTAAAGTACCCTGTAGACGTTGATCGAAAGGGGAAAGTCAGATCACTTCCCGGTCATGAAGAGTTCCCTGATGTCGGAGGAAAAATTGTTGGATCTTTTCTTGCCATGAAGGAGAATCTTACCATTTGA 3342 0.4195 MDNNYGYPYRYPNPYMYPPNPNPHPHPHPHPPYPPQDPYAHSHTHHAPPYPYPYISSHSFNYSSYPISPPPPPPPSSSSNSTAPFDYAYPPPAPLHQLVPSAPPSYPYHVPPGSHHSPPQHSLSHSHHASLLQQGSSSQYYYYQQNTPREDRPDLHSRHNSFSGPYWPDTSSSTAGGGVSQTSGGDNSRPSAYPRLDDLMNNVRLSGNQPTPPASPPAPAAAGQPFMHSISVSKLQQKKEDFYGHSNNSFSGWGSSYPSRVNSGRLSDYSGSFNGSMHSQSMQIVPVQNKGSLRFLLLHGNLDIWVHEAKNLPNMDMFHKTLGDMFGKLPGSVSNKIEGTMNKKITSDPYVSISVANAVIGRTFVISNSENPVWSQHFYVPVAHNAAEVHFLVKDSDVVGSQLIGIVAIPVEHIYSGAIVEGTYPILNNNGKPYKQGAVLSLSIQYIPMEQLSFYHQGVGAGPEYIGVPATYFPLRKGGNVTLYQDAHVPDGSLPNVLLDSGMFYVHGKCWHDIFDAISQARRLIYITGWSVWHKVRLIRDAGYSSDYTLGDLLKTKSQEGVRVLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVHVLLCPRSAGKRHSWVKQREVGTIYTHHQKTVIVDADAGNNRRKIVAFVGGLDLCDGRYDTPQHPLFKTLQTIHKDDYHNPTFTGNTGGCPREPWHDLHTKIDGPAAYDVLTNFEERWLKASKPQGIKKLKISYDDALLRLERIPDVIGINDTPSGENDPESWHVQIFRSIDSSSVKGFPKDPREATGKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIKANERFAVYIVIPMWPEGVPTGAATQRILFWQNKTMQMMYETISKALVEAGLEAAFSVQDYLNFFCLGNREAINIYENISVSGNPPPANSPQANSRNSRRFMIYVHSKGMIVDDEYVIVGSANINQRSMEGTRDSEIAMGAYQPHHTWARKHSNPLGQIHGYRMSLWAEHTGTIDDCFLQPESLECVRKVRAIGEMNWKQFAANDVTEMRGHLLKYPVDVDRKGKVRSLPGHEEFPDVGGKIVGSFLAMKENLTI 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02070 1113 FunFam Phospholipase D 772 1005 - -
Mepo3g02070 1113 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 625 660 IPR001736 GO:0003824
Mepo3g02070 1113 CDD C2_plant_PLD 296 447 - -
Mepo3g02070 1113 Pfam Phospholipase D Active site motif 626 660 IPR001736 GO:0003824
Mepo3g02070 1113 Pfam Phospholipase D Active site motif 960 986 IPR001736 GO:0003824
Mepo3g02070 1113 SUPERFAMILY Phospholipase D/nuclease 805 1045 - -
Mepo3g02070 1113 Gene3D C2 domain 296 438 IPR035892 -
Mepo3g02070 1113 FunFam Phospholipase D delta 501 739 - -
Mepo3g02070 1113 ProSiteProfiles C2 domain profile. 278 424 IPR000008 -
Mepo3g02070 1113 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 959 986 IPR001736 GO:0003824
Mepo3g02070 1113 SMART pld_4 959 986 IPR001736 GO:0003824
Mepo3g02070 1113 SMART pld_4 625 660 IPR001736 GO:0003824
Mepo3g02070 1113 MobiDBLite consensus disorder prediction 87 114 - -
Mepo3g02070 1113 MobiDBLite consensus disorder prediction 66 131 - -
Mepo3g02070 1113 SMART C2_3c 301 423 IPR000008 -
Mepo3g02070 1113 MobiDBLite consensus disorder prediction 18 38 - -
Mepo3g02070 1113 MobiDBLite consensus disorder prediction 148 224 - -
Mepo3g02070 1113 Pfam C2 domain 300 426 IPR000008 -
Mepo3g02070 1113 Gene3D Endonuclease Chain A 505 739 - -
Mepo3g02070 1113 Pfam Phospholipase D C terminal 1033 1103 IPR024632 -
Mepo3g02070 1113 PANTHER PHOSPHOLIPASE D 290 1104 IPR015679 -
Mepo3g02070 1113 Gene3D Endonuclease Chain A 775 1009 - -
Mepo3g02070 1113 MobiDBLite consensus disorder prediction 117 131 - -
Mepo3g02070 1113 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 293 450 IPR035892 -
Mepo3g02070 1113 SUPERFAMILY Phospholipase D/nuclease 503 724 - -
Mepo3g02070 1113 FunFam Phospholipase D delta 295 442 - -
Mepo3g02070 1113 MobiDBLite consensus disorder prediction 18 46 - -
Mepo3g02070 1113 MobiDBLite consensus disorder prediction 163 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02070 Mepo-Chr3 30130101 30136709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02070 173 1113 Phospholipase D Gene Family (Wang group) AT2G42010 73.864 0.0 1453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02070 K01115 - gmx:100801286 1737.62