Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02037 ATGGCATCGTCTCAAGAAAAACGGCACCGTTCAATCTTTGAACTTCCATCAAACTACTTCGACTCGTGCCGTCTTGTTCCTTCTCCTCACTCTTCACTTCCCGACCACCACACCCAGACCCTTCAACCGCCCTCCAACGACGCCGTTGATGATGTTCAAAACGCCGTCGTTTCAGGTCCTAGATTGACCTGCAATACTTGCAAGGCTCACTTCGATTCTCTTCAAGATCAACGTTCTCACTTCAAATCCGATATTCATCGTTTCAATGTGAAGCTGACAATTGCTGGGAAAAATATTGTGAAGGAAGAGGATTTTGAGGATTTGACATCTGATTTTGTCAAAGACTATGACGTGTCAAGTATATCTGGATCAGAAAGTGATGATGATGATGACAGTGAAAATGAGTCTCGGAGTCAAAATGTAGTGTCTAATAAATCAGGCATAAGCTTAAAACAAAAGCTATTCGTATCTCTTCAGACAGGGCAAAGAGTTTCTGCATGGAAGTCTTTGATCATGAATGTGAGCGAAAATGTGTTGTATGAGGATGAACAAGTGCAGAAAAATTTGGTGGAGAGGTTGAAATCTCTGACGGTTGAGCCCAGGGATAACACCCGTTTGAGGATCGTTCTGCTTGCATCTGGTGGGCACTTTGCTGGTTGTGTCTTTGATGGTGATACAGTTGTGGCTCACAAGACATTTCATAGATATGTGGTGAGGGCCAAGGCCGGAAAAAAACAGTCAGCTAAAGATGCTTCTGGCAGGACTGTACATTCTGCTGGTGCTTCACTTCGTCGCTACAATGAACTTGCATTAAAAAAGGAAGTTCACGAACTGCTTACTTCTTGGAGACCTTATTTTGATGCTTCCATTTGCATTTTTATACACGCACCTTCAAGTAGTCGCGAACTGCTTTATGATGGAGAAAAGCCATGTTTTACCAATCCACAATGTGTTAGAAATATTGCTATGATTGTCCGCAGGCCAACTCTCAGAGAAGCAAAACGTGTGTATGGCCAGTTGACCTTAGTATCCTATGAAGCAGATGAGAAGGAAATTTTATCAAGTAACCAACAGGACGGGGTGCCAATTCGCAAAGCTAAAAGAAATGGCGCCCCAATTGCGAGTAAAGTGGACATCACTGGGTTGGATGAAAACGACAAAGCTGAAGGTTGTTCCAGTAACCAAAATGATGAACCTCTTCTTTTGAGTAATGACGAAAGTGAGAATGAGTTACCTGTTATATCAACTCCTTTACATCAAGCAGCACAATCTGGTGACTCTGAAAAGGTTATGGAACTCTTAGAACAGGGCTTAGATCCATGTGTCAAAGATGAAAGGGGACGGACGCCATATATGTTGGCACCTGACAAGGAAGTCAGGAACACTTTCAGAAGGTTTATGGCTTCCAATCTTGACAAGTGGGATTGGAATGCTGCAAAAGTGCCTAGTGCATTGACTAAAGAAATGGAAGAATCACAAGCTGCTAAGCAGGCAGAAAAAGATGCTAAGAGAAAAGCTAGAGCAAAAGAATTAAAGAAATTACGTAAAGCAAAAGAAAAGAAGGCTCAGGCCGAAGCTGCTGAAAAACAAAAGATCGCTTCAACATCTGCTACAGGACAATCTCAACCAAAAAGTGGCGTGAAATTATCGAAAGAGGAGGAAGTGAAAAGAGCACAAGATGCAGAAAGAGAAAAAAGAGCAGCTGCTGCAGAGAAAAGAATGGCTGCCCTCAAAATTCAAGCTAATAATTCAACCACTTCAGCTAACAACAGTGGATTAGCCGGTGACATACTCTGTTCATGTTGTAATTCTTCACTTGCTGGTAAAGTTCCTTTCCACCGGTATAATTACAAATACTGCAGCACTTCATGCATGCATGTACACAAAGAGATCCTAGAAGATGGATGA 1908 0.4224 MASSQEKRHRSIFELPSNYFDSCRLVPSPHSSLPDHHTQTLQPPSNDAVDDVQNAVVSGPRLTCNTCKAHFDSLQDQRSHFKSDIHRFNVKLTIAGKNIVKEEDFEDLTSDFVKDYDVSSISGSESDDDDDSENESRSQNVVSNKSGISLKQKLFVSLQTGQRVSAWKSLIMNVSENVLYEDEQVQKNLVERLKSLTVEPRDNTRLRIVLLASGGHFAGCVFDGDTVVAHKTFHRYVVRAKAGKKQSAKDASGRTVHSAGASLRRYNELALKKEVHELLTSWRPYFDASICIFIHAPSSSRELLYDGEKPCFTNPQCVRNIAMIVRRPTLREAKRVYGQLTLVSYEADEKEILSSNQQDGVPIRKAKRNGAPIASKVDITGLDENDKAEGCSSNQNDEPLLLSNDESENELPVISTPLHQAAQSGDSEKVMELLEQGLDPCVKDERGRTPYMLAPDKEVRNTFRRFMASNLDKWDWNAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLRKAKEKKAQAEAAEKQKIASTSATGQSQPKSGVKLSKEEEVKRAQDAEREKRAAAAEKRMAALKIQANNSTTSANNSGLAGDILCSCCNSSLAGKVPFHRYNYKYCSTSCMHVHKEILEDG 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02037 635 Coils Coil 551 578 - -
Mepo3g02037 635 MobiDBLite consensus disorder prediction 529 546 - -
Mepo3g02037 635 ProSitePatterns Zinc finger C2H2 type domain signature. 64 86 IPR013087 -
Mepo3g02037 635 MobiDBLite consensus disorder prediction 492 506 - -
Mepo3g02037 635 Pfam Vms1-associating treble clef domain 599 630 IPR041540 -
Mepo3g02037 635 Pfam Bacteroidetes VLRF1 release factor 208 345 IPR041175 -
Mepo3g02037 635 ProSiteProfiles Ankyrin repeat profile. 416 445 IPR002110 GO:0005515
Mepo3g02037 635 MobiDBLite consensus disorder prediction 487 569 - -
Mepo3g02037 635 MobiDBLite consensus disorder prediction 119 143 - -
Mepo3g02037 635 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 2 634 IPR047139 -
Mepo3g02037 635 Coils Coil 489 528 - -
Mepo3g02037 635 SUPERFAMILY Ankyrin repeat 415 468 IPR036770 -
Mepo3g02037 635 ProSiteProfiles Ankyrin repeat region circular profile. 416 445 - -
Mepo3g02037 635 MobiDBLite consensus disorder prediction 547 569 - -
Mepo3g02037 635 MobiDBLite consensus disorder prediction 378 402 - -
Mepo3g02037 635 Gene3D - 400 537 IPR036770 -
Mepo3g02037 635 MobiDBLite consensus disorder prediction 387 402 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02037 1 586 C2H2 Transcription Factor Family AT1G01930 52.893 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02037 K26089 - gmx:100527709 837.41