Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02026 ATGAGTCTAAACTCTAGTGGCAGCGGTAGCAGTGGTGGCGGCGGAAGCAGTGGAAGCCCTTGTGGGGCTTGCAAGTTTTTGAGGAGGAAGTGTGTGCAAGGGTGTGTTTTTGCTCCATACTTTGATTCAGAGCATGGTACAACACACTTTGCAGCTGTGCACAAAGTGTTTGGGGCTAGCAATGTATCCAAACTCCTTCTTGGCATTCCAACTTGTAGGAGGCTTGATGCTGCAGTCTCTCTTTGTTATGAAGCTCAATCAAGGTTGAGAGATCCTATCTATGGATGTGTAGGTCACATCGTTGCCCTTCAGCAACAGGTGATGAGTTTACAAGCTGAACTCTCCTACCTACAAAGCCACATTAATTCAACAGGGCTAACCCAACAGCCACCTCTACCACCACCACAGGCGACCGCGGCCCCAACAGTCTTCTCCTTTGCTGACCTACCACCAACCACCGCCACAACCATGCCGGTCACCTATGATATGTCTACACTTTTCGACTCAATGGGACAACCTTCATTGTCCATGCAACAACAGAGGTCCAGTATTGACCCACGTCAATACTTAGCTGCTCATCATGCCCCAACATCAACCACTGCTGGGATTCAATCAGTGGCATGTGACCTTACTCATAGACAAATTGGCTCTTCATCTGTGCCATCCTCCAATGCCTCATCATCTGCTTCGTATTCCAAATTTTCTAAATGA 711 0.481 MSLNSSGSGSSGGGGSSGSPCGACKFLRRKCVQGCVFAPYFDSEHGTTHFAAVHKVFGASNVSKLLLGIPTCRRLDAAVSLCYEAQSRLRDPIYGCVGHIVALQQQVMSLQAELSYLQSHINSTGLTQQPPLPPPQATAAPTVFSFADLPPTTATTMPVTYDMSTLFDSMGQPSLSMQQQRSSIDPRQYLAAHHAPTSTTAGIQSVACDLTHRQIGSSSVPSSNASSSASYSKFSK 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02026 236 Pfam Lateral organ boundaries (LOB) domain 20 118 IPR004883 -
Mepo3g02026 236 PANTHER LOB DOMAIN CONTAINING PROTEIN 16 148 - -
Mepo3g02026 236 MobiDBLite consensus disorder prediction 214 236 - -
Mepo3g02026 236 ProSiteProfiles LOB domain profile. 19 121 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02026 Mepo-Chr3 29693355 29697062 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02026 23 214 AS2 family AT2G45420 52.913 3.37e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo3g02026 LOB 5.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02026 K21994 - gmx:100777737 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02026 3 29693355 29697062 Mepo3g02026 3 29693355 29697062 ECH
Mepo3g02026 3 29693355 29697062 Mepo1g03561 1 41373353 41379475 PCT