Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02025 ATGGATTTGGGATGTGGTGATGACGGTGGTGGACCATGTGGTGCTTGCAAGTTTTTGAGAAGAAAGTGTGTGAAAGGTTGTTGCATATTTGCACCATATTTTGAGTCATCAGGTCAAGGAAGTGCTCATTTTGCTGCAGTTCATAAGGTTTTTGGTGCTAGCAATGCTGCTAAGCTACTCACACGCATTCCAGTTCATAAGCGTCTTGATGCTGTTGTTACTCTCTGCTATGAAGCTCTTGCTAGGGCTACTGACCCTGTTTATGGTTGTGTTGCTCACCTCTTTGCTCTTCAACAACAGGTTGTGGAGTTGCAAGCAGAGTTAGCCTATGTACAAGCCCGTCTTTCAATATTGAATCGCATCTCTGAAGATCCTCAAAGCTCTTCAATATCCCCAACTTTGCATTCATCCTTACTTCATCATTTGTCATCAAACAATGAAACTTCTTACATGTCCATGCACTTTGGTCATCCTCTTCAAAATCAATATCATCAAACACCTTTTGAAAATCCATCATACTATTCCTATCATCAACAATTTCATGACCAGGAATTCCAAGCTTTGCCTAGAGATTTTTAG 579 0.4093 MDLGCGDDGGGPCGACKFLRRKCVKGCCIFAPYFESSGQGSAHFAAVHKVFGASNAAKLLTRIPVHKRLDAVVTLCYEALARATDPVYGCVAHLFALQQQVVELQAELAYVQARLSILNRISEDPQSSSISPTLHSSLLHHLSSNNETSYMSMHFGHPLQNQYHQTPFENPSYYSYHQQFHDQEFQALPRDF 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02025 192 ProSiteProfiles LOB domain profile. 11 115 IPR004883 -
Mepo3g02025 192 PANTHER LOB DOMAIN CONTAINING PROTEIN 10 157 - -
Mepo3g02025 192 Pfam Lateral organ boundaries (LOB) domain 12 112 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02025 Mepo-Chr3 29674563 29677228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02025 10 157 AS2 family AT4G00210 60.403 3.80e-53 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo3g02025 LOB 3.4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02025 - - mtr:11426685 344.354