Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02023 ATGGAGGGGAGAGAAGGTAACAACACTGGAGTAACAGTGATAGGAGCAGAAGCTCCATCAACTTATCATATGGCACCAAGAAGTGAAGCTCCAACTCAACATGGAACTGTTCCTGAATCAGGGAATGTGGCTCTTGGTGTATCACCGGTGAGTCTGGGAATGGATGGAGGAACACTTAAGAAGAAAAGGGGTAGACCAAGGAAATATGGGCCGGACGGGTCGGTTACTGCTGTGGCATTGTCACCGTTGCCAATCTCGTCTTCAGCTCCTTTTTCTAATGAATTTTCATCTGGGAAGCAGGGGAAACCGAAGGGGATGGAGTTCAAGCAGTCGAAAAAAGCTGGAGCTGATCCTCTAGGTGACTCGGTCGGTACCAACTTTATGCCGCATATCATTACTGTCAATGCAGGCGAGGACATTACAATGAAGGTTATATCCTTTTCGCAGCAAGGTCCGCGAGCTATATGCATCCTATCTGCTAGTGGCGTGATTTCAAATGTTACGCTTCGTCAGCCTGATTCTTCTGGCGGAACTTTGACCTATGAGGGTCGTTTTGAGATACTTTCACTGTCTGGATCGTTCATGCCTACCGACAACCAAGGAACAAGAAGCCGGTCTGGTGGAATGAGTGTTTCTTTGTCAAGTCCTGATGGTCGTGTCGTAGGCGGTGGAGTTGCCGGTCTTCTTGTAGCTGCCACTCCTGTGCAGGTGGTTGTTGGAAGTTTTCTGCCAAGTAACCAACAAGACCAGAAAATAAAGAAGCCAAAATCTGATTATGCATCGCCTACTGTTACCGAACCTATTGCAGTGTATTCAGCACCACCTTCAACCAATGGCGAAAGGGTCGATGTATTGAGTGGACATCTACTGCAAAATCCGGGAACATTAAACTCAAACCTTACTTCTCCCTCAGCATTTCGCCGAGAAAACTGGGTTAACATGCACACCATGCCGGACTCAATGAAGTCTGCAACTGATATTAACATATCTTTGCCTGATAATTAA 1005 0.4677 MEGREGNNTGVTVIGAEAPSTYHMAPRSEAPTQHGTVPESGNVALGVSPVSLGMDGGTLKKKRGRPRKYGPDGSVTAVALSPLPISSSAPFSNEFSSGKQGKPKGMEFKQSKKAGADPLGDSVGTNFMPHIITVNAGEDITMKVISFSQQGPRAICILSASGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRSGGMSVSLSSPDGRVVGGGVAGLLVAATPVQVVVGSFLPSNQQDQKIKKPKSDYASPTVTEPIAVYSAPPSTNGERVDVLSGHLLQNPGTLNSNLTSPSAFRRENWVNMHTMPDSMKSATDINISLPDN 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02023 334 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 25 297 IPR039605 GO:0003680
Mepo3g02023 334 MobiDBLite consensus disorder prediction 89 121 - -
Mepo3g02023 334 SUPERFAMILY AF0104/ALDC/Ptd012-like 127 245 - -
Mepo3g02023 334 FunFam AT-hook motif nuclear-localized protein 1-like 129 260 - -
Mepo3g02023 334 ProSiteProfiles PPC domain profile profile. 124 265 IPR005175 -
Mepo3g02023 334 Pfam Plants and Prokaryotes Conserved (PCC) domain 129 242 IPR005175 -
Mepo3g02023 334 Gene3D - 129 259 - -
Mepo3g02023 334 CDD DUF296 129 219 IPR005175 -
Mepo3g02023 334 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02023 Mepo-Chr3 29654629 29657511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02023 6 269 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 56.811 2.11e-97 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02023 - - gmx:100777213 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02023 3 29654629 29657511 Mepo3g02023 3 29654629 29657511 ECH
Mepo3g02023 3 29654629 29657511 Mepo1g03559 1 41322005 41327642 PCT