Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02018 ATGGAAGAAGGGAAAGGAAGAGTTTGTGTGACTGGAGGTACAGGGTTTCTTGGTTCATGGATTATTAAGAGACTCCTTGAAGATGGTTACACTGTTAATGCCACTATTAGAGCTGATCCAGGGCGCAAGAAAGATATTAGCTTCCTCACAAATCTTCCAGGTGCATCCCAAAAGCTAAAATTCTTCAATGCTGATCTTAGTATTCCAGAAAGTTTCAATGCAGCAATTGAAGGATGCACAGGAATATTCCACACTGCTAGTCCAATAGATTTGGAAATGAATGAATCAGAAGAAATAGATAAAGATGATGATGTAATGGATGAGAGTTATTGGAGTGATGAAAATCTTCTTAGAGATTTAAAACCATTTGCTTGGTCATATTCAATTTCTAAAACTATGGCAGAGAAGGCTGTTCTAGAATATGGAAAACAACATGGTTTAGATGTTGTGACTATAATACCAACTTTTGTTCTTGGACCCTTCATTTGTCCTAAGCGTCCTGGTTCAATCTATACCTCTCTGTCTTTGTTATTTGGGGACAAGAATCCATTTGGCTTCTCTCGTCTCCATATGGTGCATGTTGATGATATTGCAAGATCACATATATTTCTGCTTGAGCATCCTAATCCAAAAGGGAGATATAATTGTTCACCATTCATTGCAAATATTGAAGAAATTGCTCAACTTATTTCTGCCAAATACCCTGAATTTCATATACCAACACTAGAGGAGCTGAAGGAAATTAAAGGTGACAAGCTTCCACATTTAACCTCAAAAAAACTCATGGATGCTGGATTCGAGTTCAAACACAGCCTTGAGGAAATGCTGGACGATACAATTCAGTGTTGCAAGGAAAAGGGTTATCTTTGA 870 0.3759 MEEGKGRVCVTGGTGFLGSWIIKRLLEDGYTVNATIRADPGRKKDISFLTNLPGASQKLKFFNADLSIPESFNAAIEGCTGIFHTASPIDLEMNESEEIDKDDDVMDESYWSDENLLRDLKPFAWSYSISKTMAEKAVLEYGKQHGLDVVTIIPTFVLGPFICPKRPGSIYTSLSLLFGDKNPFGFSRLHMVHVDDIARSHIFLLEHPNPKGRYNCSPFIANIEEIAQLISAKYPEFHIPTLEELKEIKGDKLPHLTSKKLMDAGFEFKHSLEEMLDDTIQCCKEKGYL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02018 289 Pfam NAD dependent epimerase/dehydratase family 123 215 IPR001509 -
Mepo3g02018 289 Pfam NAD dependent epimerase/dehydratase family 8 90 IPR001509 -
Mepo3g02018 289 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 90 - -
Mepo3g02018 289 Gene3D - 99 289 - -
Mepo3g02018 289 Gene3D - 5 98 - -
Mepo3g02018 289 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 287 IPR036291 -
Mepo3g02018 289 CDD FR_SDR_e 8 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02018 Mepo-Chr3 29576710 29580925 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02018 4 289 Monolignol Biosynthesis Gene Families AT2G02400 34.743 7.40e-52 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02018 - K13265 gmx:102659875 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02018 3 29576710 29580925 Mepo3g02018 3 29576710 29580925 ECH