Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01994 ATGGAAGGGAACGGAGCATCATCTTCATCGTCGAGAAGATATGGATTCCCGTCGGCTGCAAGCATAATTCAAGCACCGTTATCAGCGCTTTTGGAATATTCCGGTATTCTCCCGGCGAGGTCAAACCAGCAGCATCAACCAATTCCCGATTCTGCCCCTAACGACGGTGAGGTTTCAATTAGGATCATCGGGTCTAACGAGCAAGATAATCATCGGGATGAACAGGGTAGTCCAGTGGTGGTGAATGATGGTGGTGGTGCGGCTGCGATGACGAATTCCTCGGAACATGGTGATGTTGAGGGCGTTTTGAGGACGGGGAGTGGGAATGTTGATGCAGAAGCAGGTGGTGGTGGTGACGTTGGTGCTAATGGGAGAGATTCTTCTTATCAAAGATATGATATTCAACATGCTGCTAGGTGGATTGAACAAGTCTTGCCGTTTTCTTTGCTTCTTTTGGTGGTTTTCATTCGTCAACATTTGCAAGGGTTTTTTGTTACCATTTGGATTGCTGCTGTGCTTTTTAAGTCAAATGACATACTGCGGAAACAAACGGCATTGAAGGGAGAGAGGAAAATGCCAGTTTTGATTGGAATTTCGGTTGCGTTTGCACTTCATGTGGTTGGTGTTTATTGGTGGTATCAGAATGATGATCTAATGTATCCATTAGTCATGCTTCCTCCCAAGGAGATACCGCCTTTTTGGCATGCTATTTTCATCATCATGGTGAATGATACTTTGGCGCGCCAGGCTGCAATGGTAGTCAAGTGTATATTGTTAATGTATTATAAGAACAGCAGAGGCCGCAATTATCGTAAGCAGGGGCAAATGCTGACTTTAGTTGAATACCTCCTCTTACTTTACCGAGCCTTGTTGCCAGCACCAGTTTGGTATCGTTTCTTCCTGAACAAAGAATATGGAAGCCTCTTTTCATCACTGATGACAGGATTGTATCTAACATTTAAGCTCACATCTGTTGTTGAAAAGGTGCAATCTTTCTTTGCTGCAGTGAAAGCATTGTCACGTAAAGAAGTGCACTATGGGGCTCATGCAACATCAGAACAGGTGATTGCAGCCGGTGATCTTTGTGCCATTTGTCAAGAGAAGATGCATGCCCCAATCTTACTTCGTTGTAAACACATTTTCTGTGAAGACTGTGTATCAGAGTGGTTTGAGAGGGAAAGGACATGCCCATTGTGCAGGGCTTTGGTAAAACCTGCAGACCTCAGGTCATTTGGTGATGGTTCTACTAGTTTATTTTTCCAGTTATTCTGA 1272 0.4434 MEGNGASSSSSRRYGFPSAASIIQAPLSALLEYSGILPARSNQQHQPIPDSAPNDGEVSIRIIGSNEQDNHRDEQGSPVVVNDGGGAAAMTNSSEHGDVEGVLRTGSGNVDAEAGGGGDVGANGRDSSYQRYDIQHAARWIEQVLPFSLLLLVVFIRQHLQGFFVTIWIAAVLFKSNDILRKQTALKGERKMPVLIGISVAFALHVVGVYWWYQNDDLMYPLVMLPPKEIPPFWHAIFIIMVNDTLARQAAMVVKCILLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPAPVWYRFFLNKEYGSLFSSLMTGLYLTFKLTSVVEKVQSFFAAVKALSRKEVHYGAHATSEQVIAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01994 423 MobiDBLite consensus disorder prediction 66 122 - -
Mepo3g01994 423 Pfam Zinc finger, C3HC4 type (RING finger) 360 403 - -
Mepo3g01994 423 CDD RING-HC_RNFT1-like 360 400 - -
Mepo3g01994 423 ProSiteProfiles Zinc finger RING-type profile. 362 400 IPR001841 -
Mepo3g01994 423 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 7 423 IPR044235 GO:0061630|GO:1904294
Mepo3g01994 423 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 336 410 IPR013083 -
Mepo3g01994 423 SMART ring_2 362 399 IPR001841 -
Mepo3g01994 423 ProSitePatterns Zinc finger RING-type signature. 377 386 IPR017907 -
Mepo3g01994 423 SUPERFAMILY RING/U-box 353 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01994 Mepo-Chr3 29199880 29205279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01994 1 423 C3H Transcription Factor Family AT5G01960 70.833 0.0 623
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01994 3 29199880 29205279 Mepo3g01994 3 29199880 29205279 ECH