Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01983 ATGATGCCACAATTCTTCTTTGTCACTATACAAATTTTCTTACTACTACTTGTGTTTCCTCAAACTAAATCTGATTTAAATTCAGAAAAGCAAGCACTACTTGATTTTATTACTGCATTACATCATGGAGGAAAACTCAACTGGAGTACTAATACCTCAATATGCTCTTCTTGGGTGGGAGTTAAATGCAATCCTAATGGCTCACATGTTCATTCTGTGAGGCTTCCGGGCGTTGGTTTGCGCGGTTCTCTCCCGGAAAACACCCTTGGTAAGCTACACGGTCTTACGAGTCTCAGTCTTAGGTCTAACAGCTTGTTTGGAAACCTTCCAAGTGACATATTTTTCATTCCTTCTCTAAGATTTATATATCTTCAACATAACAACTTTTCAGGTCATATTCCTAACTATTTGCCACCTCATCTTTTGTTTCTTGATTTGTCATATAACTCTTTCACTGGAAAAATTCCAAATATAATCCAAAACTTGACATATCTAATAGGAGTAAACCTTCAAAATAACTCTCTTATAGGACCTATTCCTTATGTTGTTGACCTTCCTAATCTTAAGAATTTGGATTTGAGCTTCAACTATTTAAATGGTGCAATTCCTTTAGGGCTTCATAAGTTTGATGCATCCTCATTTAAGGGGAATTTAGGGTTATGTGGTGCACCTTTGAAACAATGTTCTTTAGCTTCTTCCCCTACTACTATTTTGTCTCCACTAATAGTCTCACAAAAAGTACCTAGTGATACCTCAAGCAAGAAATTGAGTACATGGGAGAAAATTGTTATTGCTTTGGGAGTCTTTGCAGTAGTGCTTCTTCTAGTTCTTGTAGCAATGTTCTGCTGTTTCAAGAAAAAAGTAGGTGAACAAAATGTAGCACTTAAAGAGAAGGGAGAGAAGCTTATGGAGGAATTTGGAAGTGGTGTGCAAGAAAATGTGAGAAACAGGCTAACATTTTTTGAAGGCTGTGCTTATAATTTTGATCTTGATGATTTGTTAAGAGCCTCAGCTGAAGTGCTTGGAAAGGGAAGTTGTGGAACAACTTACAAAGCCATTCTGGAAGAGGGGACCATAGTGGTTGTGAAGAGGTTAAAAGAAGTGACAGTTGGGAAAAGGGAATTTGAACAGCAAATGGAGATTGTTCAAAAGCTTCATCACCATCCAAATGTGGTTCCACCTCGTGCTTACTATTATTCCAAGGATGAAAAATTAGTAGTTTATGACTACTTCACATCTGGCAGTTTTTCCAAGTTATTGCATGGAACAAGTGAAACTGGACGAACTCAACTAGATTGGGATTCCAGATTGAAGATCATGGCTGGAGCTGCTAAGGGCATTGCCCATATCCACTCAGCCAATGGAAGGAAACATGTCCATGGCAATATAAAATCATCCAATGTGCTTCTCACAATAGATCTTCAAGGCTGCATATCAGATTTTGGCTTAACACCTCTTACAAGTTTATGTGTCTCACCCAAAAGTCCTCCAGGCTACCGAGCACCAGAGGTGAACGAAAGCAGAAAATACACTCAAAAGTCTGATGTATACAGCTTTGGTGTTCTTCTTCTTGAGATGCTGACAGGGAAAACACCAGTTCAGTACTCGGGGCATGATGATGTGGTTGATCTTCCAAAATGGGTGCAATCTGTTGTTAGAGAGGAATGGACTGCTGAGGTGTTTGATCTTGATCTAATGAGATATTCAAGCATTGAAGAAGAACTGGTGCAGATGTTGCAATTGGCAATGGCATGTGTAGCAGAGATGCCTGACACAAGACCTTCAATGGAGGAAGTTGTTAGGATGATTGAAGACATAAGGGCATCCATTTATTAA 1836 0.3894 MMPQFFFVTIQIFLLLLVFPQTKSDLNSEKQALLDFITALHHGGKLNWSTNTSICSSWVGVKCNPNGSHVHSVRLPGVGLRGSLPENTLGKLHGLTSLSLRSNSLFGNLPSDIFFIPSLRFIYLQHNNFSGHIPNYLPPHLLFLDLSYNSFTGKIPNIIQNLTYLIGVNLQNNSLIGPIPYVVDLPNLKNLDLSFNYLNGAIPLGLHKFDASSFKGNLGLCGAPLKQCSLASSPTTILSPLIVSQKVPSDTSSKKLSTWEKIVIALGVFAVVLLLVLVAMFCCFKKKVGEQNVALKEKGEKLMEEFGSGVQENVRNRLTFFEGCAYNFDLDDLLRASAEVLGKGSCGTTYKAILEEGTIVVVKRLKEVTVGKREFEQQMEIVQKLHHHPNVVPPRAYYYSKDEKLVVYDYFTSGSFSKLLHGTSETGRTQLDWDSRLKIMAGAAKGIAHIHSANGRKHVHGNIKSSNVLLTIDLQGCISDFGLTPLTSLCVSPKSPPGYRAPEVNESRKYTQKSDVYSFGVLLLEMLTGKTPVQYSGHDDVVDLPKWVQSVVREEWTAEVFDLDLMRYSSIEEELVQMLQLAMACVAEMPDTRPSMEEVVRMIEDIRASIY 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01983 611 Pfam Protein kinase domain 338 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01983 611 SUPERFAMILY L domain-like 46 225 - -
Mepo3g01983 611 FunFam Probable inactive receptor kinase RLK902 26 181 - -
Mepo3g01983 611 FunFam pollen receptor-like kinase 1 303 410 - -
Mepo3g01983 611 Gene3D Transferase(Phosphotransferase) domain 1 412 610 - -
Mepo3g01983 611 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Mepo3g01983 611 PANTHER OS05G0588300 PROTEIN 7 607 - -
Mepo3g01983 611 Gene3D Phosphorylase Kinase; domain 1 303 410 - -
Mepo3g01983 611 ProSiteProfiles Protein kinase domain profile. 335 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01983 611 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 411 610 - -
Mepo3g01983 611 Gene3D Ribonuclease Inhibitor 139 230 IPR032675 -
Mepo3g01983 611 Gene3D Ribonuclease Inhibitor 27 138 IPR032675 -
Mepo3g01983 611 SUPERFAMILY Protein kinase-like (PK-like) 339 603 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01983 Mepo-Chr3 29088500 29090701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01983 24 609 Receptor kinase-like Gene Family AT5G58300 59.459 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mepo3g01983 Pkinase 6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01983 - - gmx:100810832 920.228