LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g01979	ATGGTCATGATGAGGAACATGAACAAATACTTTGTTTGTGTTCCACTGTTTGTGTTCTTTGTGTTAGCTATTGAGCTTGTTCTAGCAGCAGATTTTAAGCCAACAGATAAAATTCTGCTGAATTGTGGCGGTCCTGCTGTTAGTACTGATCCTGATGGCCGTGAATGGAACACTGATAATGGTTCAAAATTTGGTTCATCGGCTGTAAAATCCACCACATCACAGGCTGCAACTCAAGATCCTGCAGTTCCACAGATTCCGTTTATGACGGCGCGTGTTTTTCAATCACCGTATACCTATAGTTTTCCGGTGGCTTCCGGTTGGAAGTTCTTACGGTTGTACTTTTATTCGGCTTCTTATGGTGGGCTTAATGCATCCGATGCACGGTTTGGTGTGACAGCGCAATCATACACCGTGCTTAGGAATTTCAGTGTTTCTGAGACTGCTTTGGGTTTGAATTATGATTACATTGTGAAGGAATATTGCATTCATGTTGATGAAGGAACCTTGAATGTGACTTTTACTCCATCTGCCAATGCATCTAAAGCCTATGCATTTGTAAATGGGATTGAGGTTGTGTCCATGCCTGATATTTATACTTCTACTGATGGAACCACCATGATTGTTGGTACGGGTACTACCTTCACCATTGACAACAGCACTGCACTTGAGAATATTTATAGGTTAAACGTGGGTGGGAATGATATTTCGCCTTCCAAAGATACTGGCATGTTTAGGTCGTGGACCGATGATGTGCGTTACATTTATGGGGCTGCATTTGGAGTTACCGAGACTGCTGATCCAGAAGTGAAGCTTGAGTATCCTCCGGGAACACCATCTTATATTGCTCCGTCCGATGTTTACGTGACGGCCAGATCGATGGGTCCGAATCCCAATATCAGCTTGAATTGGAACTTGACTTGGATTTTCTCAATTGATTCTGGGTTTTCCTATCTTGTGAGACTTCATTTTTGTGAGGGCACAACAACTATAACCAAGATTAATCAAAGAGTATTTGATATATTCCTCGGTAATCAAACTGCTCAGGACGGGGCTGATGTTATTGCCTGGGCAAAGAGTTTTGAACTTCCACATTCAAATGGGGTTCCGGTGCATAAAGATTATGTTGTATTTGCTCCCAATGGGCCACCGCAGCAGGACCTGTGGCTTGCACTGCATCCAGATACAACTTCCGGGTCCAATTACTACGACGCAATCTTGAATGGAGTAGAAATATTCAAAATCAGTGATAGTAAAGGTAATCTGGCAGGGACCAACCCTCCTCCTCCTCAGGTGCAAGACTTAATTGATCCGTCATTGGCTAGGAAATCTAGTAAATCCAAGAGTCATACAGGAATCATTGCTGGAGGTATTGGTGGAGGAGTTGCTTTATTACTTTTGATTGGGCTATTTGCTTTTGGCACGTCTCGTCGCCGTAGGAATGGAAAAGATTCTAGTACAAGTGAAGGGCCGTCTGGCTGGCTTCCGCTTTCTCTTTACGGTAATTCACACTCTGCAGCTTCTGCCAAGACGAACACAACCGGAAGTTACACTTCCACTCTTCCATCAAACCTTTGTCGTCATTTCTCATTTGCTGAAATCAAGGCTGCTACAAACAACTTTGACGAATCTTTGATTCTTGGTGTGGGAGGATTTGGCAAGGTTTACAAAGGAGAAATTGATGGCGGGTCAACCAAAGTTGCAATTAAACGTGGGAATCCACTCTCTGAGCAGGGTGTGCACGAATTCCAAACTGAAATTGAAATGCTCTCCAAACTTCGTCACCGACACCTTGTTTCATTGATCGGATACTGTGAAGAGAACACCGAAATGATCCTTGTCTATGATCATATGGCATATGGAACACTCAGGGAGCATCTATATAAGACTCAGAAACCTCCACTTCCATGGAAGCAAAGGCTTGAGATATGCATTGGAGCTGCTCGAGGTCTACACTATCTTCACACCGGTGCTAAATATACCATCATCCACCGTGATGTGAAGACTACAAACATTTTACTAGATGAGAAGTGGGTGGCCAAGGTTTCTGATTTTGGATTGTCCAAAACAGGTCCTACATTGGATAATACTCATGTAAGTACCGTGGTAAAGGGTAGTTTTGGTTACTTGGATCCAGAATACTTTAGGAGGCAACAACTGACCGACAAATCCGATGTGTACTCATTTGGTGTGGTTCTATTCGAGGTACTTTGCGCTCGCCCGGCTTTGAACCCAACACTTGCTAAGGAGCAAGTGAGTCTAGCTGAGTGGGCAGCTCATTGCTACAAGAAAGGCATTCTTGACCAAATCACTGATCCTTATCTGAAGGGCAAGATTGCTCCGGAATGTTTTAAGAAGTTCGCCGAGACCGCAATGAAGTGTGTAAATGACCAAGGCATTGAAAGGCCATCCATGGGTGATGTCTTGTGGAACCTTGAATTCGCTTTGCAGCTGCAAGAAAGTGCGGAGGAGAGTGGCAACGGTTTCGGAGGAATATGCGGTGAAGATGAGCCGTTGTTTGCAGATTCTAAAGGAAAGAAGGGTGTGGATGTGTTACCGGGTTATGATGGTAATGTGACCGACTCCAAAAGCAGCGGCATGTCGATGAGCATTGGAGGTAGAAGCTTGGCTAGTGAAGACTCTGATGGGTTAACTCCTAGTGCTGTGTTTTCACAAATCATGAATCCAAAAGGACGTTAA	2700	0.4407	MVMMRNMNKYFVCVPLFVFFVLAIELVLAADFKPTDKILLNCGGPAVSTDPDGREWNTDNGSKFGSSAVKSTTSQAATQDPAVPQIPFMTARVFQSPYTYSFPVASGWKFLRLYFYSASYGGLNASDARFGVTAQSYTVLRNFSVSETALGLNYDYIVKEYCIHVDEGTLNVTFTPSANASKAYAFVNGIEVVSMPDIYTSTDGTTMIVGTGTTFTIDNSTALENIYRLNVGGNDISPSKDTGMFRSWTDDVRYIYGAAFGVTETADPEVKLEYPPGTPSYIAPSDVYVTARSMGPNPNISLNWNLTWIFSIDSGFSYLVRLHFCEGTTTITKINQRVFDIFLGNQTAQDGADVIAWAKSFELPHSNGVPVHKDYVVFAPNGPPQQDLWLALHPDTTSGSNYYDAILNGVEIFKISDSKGNLAGTNPPPPQVQDLIDPSLARKSSKSKSHTGIIAGGIGGGVALLLLIGLFAFGTSRRRRNGKDSSTSEGPSGWLPLSLYGNSHSAASAKTNTTGSYTSTLPSNLCRHFSFAEIKAATNNFDESLILGVGGFGKVYKGEIDGGSTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENTEMILVYDHMAYGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPALNPTLAKEQVSLAEWAAHCYKKGILDQITDPYLKGKIAPECFKKFAETAMKCVNDQGIERPSMGDVLWNLEFALQLQESAEESGNGFGGICGEDEPLFADSKGKKGVDVLPGYDGNVTDSKSSGMSMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR	899

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g01979	899	SMART	serkin_6	541	815	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g01979	899	FunFam	Receptor-like protein kinase FERONIA	618	828	-	-
	Mepo3g01979	899	FunFam	FERONIA receptor-like kinase	221	416	-	-
	Mepo3g01979	899	PANTHER	OS03G0124300 PROTEIN-RELATED	12	484	IPR046957	GO:0004672
	Mepo3g01979	899	Gene3D	Phosphorylase Kinase; domain 1	502	617	-	-
	Mepo3g01979	899	MobiDBLite	consensus disorder prediction	862	892	-	-
	Mepo3g01979	899	ProSitePatterns	Protein kinases ATP-binding region signature.	547	570	IPR017441	GO:0005524
	Mepo3g01979	899	Pfam	Protein tyrosine and serine/threonine kinase	546	809	IPR001245	GO:0004672\|GO:0006468
	Mepo3g01979	899	Gene3D	Transferase(Phosphotransferase) domain 1	618	828	-	-
	Mepo3g01979	899	SUPERFAMILY	Protein kinase-like (PK-like)	514	814	IPR011009	-
	Mepo3g01979	899	MobiDBLite	consensus disorder prediction	862	899	-	-
	Mepo3g01979	899	Gene3D	-	38	196	-	-
	Mepo3g01979	899	Gene3D	-	222	416	-	-
	Mepo3g01979	899	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	662	674	IPR008271	GO:0004672\|GO:0006468
	Mepo3g01979	899	ProSiteProfiles	Protein kinase domain profile.	541	815	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g01979	899	CDD	STKc_IRAK	547	813	-	-
	Mepo3g01979	899	FunFam	FERONIA receptor-like kinase	37	196	-	-
	Mepo3g01979	899	Pfam	Malectin-like domain	40	415	IPR024788	-
	Mepo3g01979	899	FunFam	Receptor-like protein kinase FERONIA	513	617	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g01979	Mepo-Chr3	29035212	29039058	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo3g01979	21	899	Receptor kinase-like Gene Family	AT3G51550	73.536	0.0	1290

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Mepo3g01979		Malectin_like	6.6e-36	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g01979	-		-	gmx:100499644	1494.56