Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01972 ATGGTTTCCTCTCAGTTTTCTGGCATGTATAAACCAATGCTCTTTCCCGTTAACGATCCTGGCACCGCAACCACCGATCACGTTGAGCTAGATTTCTCTGATGTCTTTGGTCCACTCACCGTAGAAGTCAATAACGTAGATTCAACTTCTTTCGAGTCTATTGATGAATCGAGCGAGCTGGTTTATGAGGACCCTGAAGTCATTTACACCCGCTCACATTCTCTGGTTGGCCCTTCTAGTTGTATCAGCCAATCACTTAAACTCGGTAAGCTCACCATACACGAGTCTGACTCTGACAATTCACTAGTGGAGCGTGTCACTGAAGAGACCATTGAAGACGTCAAAGAGTCTTCCGTTAAGAATGTTATCATTGAGGAATCTTTGAATGATGAAGAGGAGAACCTCACGGAGATCCAAAGAGTTGGCATTGAAGATTTTGAGGTTTTGAAGGTTGTGGGGCAGGGTGCATTTGCAAAAGTGTACCAGGTGAGGAAAAAGGGAACTTCAGAAATATATGCTATGAAGGTTATGCGAAAGGACAAGATTATGGAGAAAAACCACGCCGAATACATGAAAGCTGAGAGGGAGATTTTGACAAAGATAGAGCACCCCTTTGTTGTACAACTCAGATACTCTTTTCAGACAAAATACAGATTGTATCTTGTGCTGGATTTCGTAAATGGGGGCCATCTCTTTTTTCAGCTCTATCACCAGGGCCTTTTCAGAGAGGATCTAGCACGCATATATGCAGCCGAGATTGTTTCTGCAGTTTCCCATCTCCACTCAAAGGGAATAATGCACAGGGATCTAAAACCTGAAAATATCCTAATGGATGCTGATGGCCATGTTATGTTGACTGATTTTGGATTAGCAAAAAAATTTGAAGAAAGCACAAGATCTAATTCGTTGTGTGGTACAACGGAGTACATGGCACCTGAAATTATTCTTGGGAAGGGCCATGACAAGGCTGCCGATTGGTGGAGTGTAGGCATCTTACTGTTTGAGATGCTCACTGGGAAGCCTCCCTTCTGTGGTGGGAACTGTCAGAAGATTCAGCAGAAGATAATAAAAGATAAGATTAAGCTGCCAGGATTTTTGTCAAGTGATGCGCATGCACTGTTGAAAGGGCTGCTAAATAAGGAGGCACCAAAGCGGTTGGGTTGTGGAGCTAAGGGGATTGAAGAAATTAGAGGACACAAGTGGTTCAAACCAATCAATTGGAAAAAGTTGGATGCACGTGAAATCCAACCAAGTTTTCGGCCAGATGTAGCTGGGAAGCACTGTGTTGCAAATTTTGACAAGCGCTGGACGGATATGCCTCTTGTTGATTCACCAGCTGGGAGTCCAAATGGTGGAAACCCCTTCAAGGACTTCTCTTATGTGAGACCTGCAGCCTCTTTTCTTCAAAATAACAGCCCTGCTTGCTGA 1428 0.4391 MVSSQFSGMYKPMLFPVNDPGTATTDHVELDFSDVFGPLTVEVNNVDSTSFESIDESSELVYEDPEVIYTRSHSLVGPSSCISQSLKLGKLTIHESDSDNSLVERVTEETIEDVKESSVKNVIIEESLNDEEENLTEIQRVGIEDFEVLKVVGQGAFAKVYQVRKKGTSEIYAMKVMRKDKIMEKNHAEYMKAEREILTKIEHPFVVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREDLARIYAAEIVSAVSHLHSKGIMHRDLKPENILMDADGHVMLTDFGLAKKFEESTRSNSLCGTTEYMAPEIILGKGHDKAADWWSVGILLFEMLTGKPPFCGGNCQKIQQKIIKDKIKLPGFLSSDAHALLKGLLNKEAPKRLGCGAKGIEEIRGHKWFKPINWKKLDAREIQPSFRPDVAGKHCVANFDKRWTDMPLVDSPAGSPNGGNPFKDFSYVRPAASFLQNNSPAC 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01972 475 SMART pkinase_C_6 403 462 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mepo3g01972 475 SUPERFAMILY Protein kinase-like (PK-like) 143 461 IPR011009 -
Mepo3g01972 475 PANTHER RIBOSOMAL PROTEIN S6 KINASE 108 465 - -
Mepo3g01972 475 Pfam Protein kinase C terminal domain 424 460 IPR017892 GO:0004674|GO:0005524|GO:0006468
Mepo3g01972 475 ProSiteProfiles AGC-kinase C-terminal domain profile. 403 470 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mepo3g01972 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Mepo3g01972 475 Gene3D Phosphorylase Kinase; domain 1 143 442 - -
Mepo3g01972 475 FunFam Non-specific serine/threonine protein kinase 143 249 - -
Mepo3g01972 475 Gene3D Transferase(Phosphotransferase) domain 1 226 421 - -
Mepo3g01972 475 ProSitePatterns Protein kinases ATP-binding region signature. 152 175 IPR017441 GO:0005524
Mepo3g01972 475 Pfam Protein kinase domain 146 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01972 475 SMART serkin_6 146 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01972 475 CDD STKc_AGC 152 402 IPR045270 GO:0004674|GO:0005524
Mepo3g01972 475 FunFam Non-specific serine/threonine protein kinase 226 421 - -
Mepo3g01972 475 ProSiteProfiles Protein kinase domain profile. 146 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01972 Mepo-Chr3 28989160 28993755 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01972 1 472 AGC Kinase Gene Family AT3G08720 66.598 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Mepo3g01972 Pkinase 5.9e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01972 K04688 - gmx:100804819 785.023