Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01969 ATGAGTTCTGATCAACCACTACTTTCCGAACCAGATCTTGTTCCTCCTGTCATTCATCACCGCCACCGGAGATCCGGATCCCGTGAGGCCGTCGAATTTCCTCCAACCTCCAACCACGGGGAAGTTGTGTTGGCGAAAGATTGCAGCTTCCACTCAGCATTCAACAACAACAATAACAGTAGCAGCATTTCCATTGCATCAGCTTCTGTAACAGAGTTTCAAACTCCTGATTCGCAGTTTCCTTTGGAATGCCCCACGCGGGAACAGGGACGCCTGCGATCGTGGGGTGCAATGGAACTGCATGATGTTAATACTGTGCCCTTTGAAATTTCAACAACACCATCAGCAGCACCAACACCATCATCGCGAAGGATTCGTCACAAAAGTGTGCAGTTTGATGACCAGATTTTACATGAAGATAGTGCTAGGTTGATTTATATAAATGATCCTAAGAAAACTAATGATAAGTATGAGTTTACCGGGAACGAGATTCGGACTAGTAGATACACTTTTATCACTTTTTTGCCAAAGAATTTATTTATTCAGTTTCATAGGGTTGCATATTTGTACTTCCTTGCTATTGCTGCACTTAATCAGCTTCCTCCGTTAGCTGTATTTGGGAGGACGGTGTCCCTTTTTCCACTTTTGTTTGTTCTTTTGGTTACTGCCATTAAGGATGGATATGAGGATTGGAGGAGACATAGGTCGGATAACAATGAGAATAATCGCGAGTCTTTGGTTCTTCAGTCTGGTGATTTCCGGTCGAAGGTTTGGAAAAAGATTGAGGCTGGTGAGGTTGTTAAGATTTTTGCTGATGAGACCATTCCTGCTGATATGGTCTTGTTGGGGACGAGTGATCCAAGTGGGCTTGCCTATATTCAGACAATGAATTTGGATGGAGAGTCGAATTTGAAGACGAGGTATGCCAAGCAGGAAACAGCTTCTGCGGTATCGTCGGAGGTTTGTGATGTTTCTGGGATTATTAGATGTGAGCAGCCGAACCGGAATATTTATGAGTTCACAGCTAATATGGAGTTCAATGGAATTAAGTTTTCTCTTAGCCAGTCAAACATTGTCCTACGAGGTTGCCAACTGAAGAACACAGATTGGATAATTGGTGTTGTGGTTTATGCTGGACAGGAAACAAAAGCCATGCTGAACAGTGCGGCTTCTCCTTCCAAGAGAAGCAGACTGGAAGGTTATATGAATAGAGAAACCCTTTGGTTGTCGATTTTTCTTTGTATCATGTGTTTGGTTGTGGCCATTGGGATGTGTCTTTGGCTGGTACGCCACAAGAACCAGCTTGATACCTTGCCTTACTACAGAAAAACATACCTTAACAATGGCCCGGATAAAGGAAAGAAATATAAGTACTATGGGATACCAATGGAAGCGTTTTTCTCCTTTTTGAGTTCTGTGATAGTGTTTCAGATAATGATACCCATATCTCTTTACATCACCATGGAGTTGGTTAGATTGGGGCAGTCATACTTCATGATTGAAGACTTGGATATGTATGACGCTAGCTCTGGATCAAGGTTTCAGTGTAGATCATTAAATATAAATGAAGATTTGGGTCAAATACGCTATATATTTTCAGACAAGACAGGAACACTAACAGAAAACAAGATGGAATTCCGAAGGGCTAGTGTAGATGGGAAGAATTATGGGAGCACCTTGCTTACTGCTGATAATAGTTCAGCATCAACCGATGTTATTCCTAAACAGAGATGGAAACTCAAGTCTGAAATTGCAGTTGATCCCAAACTAATGAACATGTTGCATAAAAACTCAAACAAAGACGAAAGAATAGTTGCTCATGAGTTTTTTCTTACATTGGCTGCTTGTAATACTGTGATTCCTATACTTAATGATGGTGGATTTTCTGGTTGTGGAACAAGTGAATTAAATGAATATGCAGAATGCATTGATTACCAGGGAGAATCCCCTGATGAACAAGCTCTAGTTTCTGCGGCCTCTGCATATGGATACACTCTTTTTGAGCGGACATCTGGGCATATTGTTATTGACATCAATGGTGAGAAACTCAGATTGGACGTATTGGGCTTGCATGAGTTTGATAGTGTGCGAAAGAGAATGTCCGTTGTTATTCGGTTTCCTGACAATGTTGTAAAGGTGCTAGTAAAAGGCGCTGATACATCAATGTTTAGCATTTTGGCAAATGGCAGTGAGAGCAACAATAGCTTATTGCATGCAACTCAGAGTCATTTGTGTGAATATTCTTCACAAGGTTTGCGCACCCTTGTAGTTGCCTCTAGAAGTCTTTCTGATGCTGAACTTGAGGAGTGGCAGAGCAGGTATGGAGAGGCAAGCACTGCGTTAACTGACAGAGCCAGTAAACTACGTCAAACAGCAGCTCTTATAGAATGTAATTTAAATTTACTTGGAGCAACTGGAATTGAGGACAAGCTGCAAGAGGGTGTACCAGAAGCCATTGAGTCCCTACGGCAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAACAAGAGACAGCAATCTCAATTGGTCTTTCCTGCAAACTTCTCAGTGCAGATATGCAGCAAATTGTTATAAACGGCACTTCAGAGGAGGAATGTAGAAATCTTTTGGGTGACGCAATAACCAAATATGGTGTGAGATCTTCAAGTAGAGGGAATCAGAATCTGGGGAATAAAACCAATGCTGAACATAGTGATCTTGATATTTCCAATGGTTCAAAGTCAATGAGTTTGCCCAAATGGAATCCAGGAAAAGAAGAAGGAACTGATACTCCATTGGCACTCATAATTGATGGGAACAGTTTGGTTTATATTTTGGAGAAGGAACTGGAGTCAGAGCTTTTTGACCTTGCAATTTCCTGTAAGGTTGTGCTGTGTTGTCGTGTTGCACCCTTGCAGAAGGCTGGAATTGTTGATCTGATAAAGAGCCGCACAGATGATATGACACTGGCCATAGGCGACGGGGCCAATGATGTGTCAATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGTTGGAAGGGCGTCAAGCTGTGATGGCATCAGATTTTGCTATGGGACAATTTCAGTTCTTGAAAAGATTACTTCTTGTTCATGGGCACTGGAATTACCAGCGTGTTGGTTATTTAGTTCTTTACAACTTCTACCGCAATGCTGTTTTTGTGTTGATGTTATTTTGGTATATATTATGCACGGCTTTTTCTACAACTTCTGCATTAACAGACTGGAGTAGTGTATTCTATTCTGTGTTATACACATCCGTACCCACAATTTTTGTTGGTATTTTGGACAAAGACTTGAGTCATAGGACACTCTTGCAGTATCCAAAACTGTATAGTACTGGTTACAGGCAAGAAGCTTACAATATGCAATTATTTTGGATCACAATGATTGACACAGTTTGGCAGAGCCTTGTTCTCTTTTACATACCGTTGTTTACCTATAAGGATAGTTCAATTGATATATGGAGCATGGGAAGCTTGTGGACAATTGCAGTTGTTATCCTTGTAAATGCACACCTGGCTATGGACATCAACCGTTGGGTATTAGTTACTCATATTGCTGTCTGGGGATCTTTAGTCATTACATATGGTTGCATGGTGATATTGGATTCCATTCCCATCTTTCCTTTTTACTGGACTATATATCATCTGGCTAGCTCCCCTACATATTGGATAACAATTTTGCTTATAATAATCGTGGCATTGCTACCCCGCTTTACGTGCAAAGTTGTTTATCAAATATTCTGGCCTTCAGATATCCAGATAGCAAGAGAAGCTGAGCTAATGAGAAAACGACATGATCGTCTGCAGTCAAGGCATCAAGCTTCCAGTTAA 3843 0.413 MSSDQPLLSEPDLVPPVIHHRHRRSGSREAVEFPPTSNHGEVVLAKDCSFHSAFNNNNNSSSISIASASVTEFQTPDSQFPLECPTREQGRLRSWGAMELHDVNTVPFEISTTPSAAPTPSSRRIRHKSVQFDDQILHEDSARLIYINDPKKTNDKYEFTGNEIRTSRYTFITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLLVTAIKDGYEDWRRHRSDNNENNRESLVLQSGDFRSKVWKKIEAGEVVKIFADETIPADMVLLGTSDPSGLAYIQTMNLDGESNLKTRYAKQETASAVSSEVCDVSGIIRCEQPNRNIYEFTANMEFNGIKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSRLEGYMNRETLWLSIFLCIMCLVVAIGMCLWLVRHKNQLDTLPYYRKTYLNNGPDKGKKYKYYGIPMEAFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDLDMYDASSGSRFQCRSLNINEDLGQIRYIFSDKTGTLTENKMEFRRASVDGKNYGSTLLTADNSSASTDVIPKQRWKLKSEIAVDPKLMNMLHKNSNKDERIVAHEFFLTLAACNTVIPILNDGGFSGCGTSELNEYAECIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNVVKVLVKGADTSMFSILANGSESNNSLLHATQSHLCEYSSQGLRTLVVASRSLSDAELEEWQSRYGEASTALTDRASKLRQTAALIECNLNLLGATGIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLSADMQQIVINGTSEEECRNLLGDAITKYGVRSSSRGNQNLGNKTNAEHSDLDISNGSKSMSLPKWNPGKEEGTDTPLALIIDGNSLVYILEKELESELFDLAISCKVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGLEGRQAVMASDFAMGQFQFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVLYTSVPTIFVGILDKDLSHRTLLQYPKLYSTGYRQEAYNMQLFWITMIDTVWQSLVLFYIPLFTYKDSSIDIWSMGSLWTIAVVILVNAHLAMDINRWVLVTHIAVWGSLVITYGCMVILDSIPIFPFYWTIYHLASSPTYWITILLIIIVALLPRFTCKVVYQIFWPSDIQIAREAELMRKRHDRLQSRHQASS 1280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01969 1280 FunFam Phospholipid-transporting ATPase IC 529 541 - -
Mepo3g01969 1280 SFLD p-type atpase 516 1037 IPR044492 -
Mepo3g01969 1280 Gene3D - 220 387 - -
Mepo3g01969 1280 Pfam Phospholipid-translocating P-type ATPase C-terminal 1014 1254 IPR032630 -
Mepo3g01969 1280 Gene3D - 799 1026 IPR023214 -
Mepo3g01969 1280 Gene3D - 640 776 IPR023299 GO:0000166
Mepo3g01969 1280 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 140 1266 - -
Mepo3g01969 1280 Pfam Cation transport ATPase (P-type) 648 723 - -
Mepo3g01969 1280 MobiDBLite consensus disorder prediction 885 912 - -
Mepo3g01969 1280 Gene3D - 542 568 IPR023299 GO:0000166
Mepo3g01969 1280 SUPERFAMILY Calcium ATPase, transduction domain A 242 384 IPR008250 -
Mepo3g01969 1280 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 538 815 IPR023299 GO:0000166
Mepo3g01969 1280 CDD P-type_ATPase_APLT_Dnf-like 161 1146 - -
Mepo3g01969 1280 NCBIfam phospholipid-translocating P-type ATPase 159 1261 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Mepo3g01969 1280 PRINTS P-type cation-transporting ATPase superfamily signature 986 1005 - -
Mepo3g01969 1280 PRINTS P-type cation-transporting ATPase superfamily signature 532 546 - -
Mepo3g01969 1280 Gene3D - 515 528 - -
Mepo3g01969 1280 SFLD Haloacid Dehalogenase 516 1037 - -
Mepo3g01969 1280 MobiDBLite consensus disorder prediction 15 29 - -
Mepo3g01969 1280 MobiDBLite consensus disorder prediction 1 36 - -
Mepo3g01969 1280 ProSitePatterns E1-E2 ATPases phosphorylation site. 534 540 IPR018303 -
Mepo3g01969 1280 Pfam E1-E2 ATPase 243 490 - -
Mepo3g01969 1280 Gene3D - 529 541 IPR023214 -
Mepo3g01969 1280 MobiDBLite consensus disorder prediction 885 920 - -
Mepo3g01969 1280 Pfam Phospholipid-translocating ATPase N-terminal 145 210 IPR032631 -
Mepo3g01969 1280 FunFam Phospholipid-transporting ATPase 644 779 - -
Mepo3g01969 1280 SUPERFAMILY HAD-like 519 1031 IPR036412 -
Mepo3g01969 1280 NCBIfam HAD-IC family P-type ATPase 465 555 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo3g01969 1280 NCBIfam HAD-IC family P-type ATPase 952 1072 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo3g01969 1280 SUPERFAMILY Calcium ATPase, transmembrane domain M 159 1253 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01969 Mepo-Chr3 28960792 28969486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01969 122 1263 Primary Pumps ATPases AT5G04930 56.783 0.0 1323
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01969 3 28960792 28969486 Mepo3g01969 3 28960792 28969486 ECH