Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01967 ATGGAAAATGAAAATCTAGCTCATGGTGGTCGTGGAAAGGTAATTGATGAGTTGTTAAGAGGGCATGGACTTGCAAACCAACTTAGAAATATTCTGAATGAAAGTGGTGATATTGATAATAATGATGGATCAACAATACCATTTGCTGAAGATCTTTTAAAGGAGGTGCTTACAACCTTCACTAATTCTCTCTTGTTCTTGAACAATAATCCTACTTCAGAGGGCTCTGATTTGCAACTCACCAAATCTGAGGATTCTTTTGAAAGTAATTGCAAGAGCACTTCTATTGTTAAGGAACGAAGAGGCTGTTACAAAAGAAGAAAAGTTTCACAAACATGGGAGAAGGAGTCTGAAAATCCTGAGGAAGATGGTCATCAATGGAGAAAATATGGTCAAAAAAAGATCTTGCACACCGATTTTCCAAGGAACTATTACAGGTGCACTCACAAACATGATCAAGGTTGCAAAGCAACAAAACAAGTCCAAAGAATTCAAGAGGATCCACCTCTTCACAAGACAACCTATTCTGGCCTTCATACTTGTAGAACCTTGCAAAATCCTGAGATCATAGTAGATTATCCTACTGATCACTCTTCCATGTTTCTTAGTTTTGACAACTCTTTCCCAACACCAGCCAAACAAGACTGTCCTTTTCTCTCAGTGAAAAAGGAGGAGTGCAAGGAAGAGGTTGTTCATCCTCTCTCTGGACTCACTTTTGATGATCCAGAAAAGGATGTCACACTATCATCAACACTTGATTCTCATGATCATTTAGGTGTCAACATTCCTGATATCATGTATGATGATGTCCTTAATTGGCCTCTTTCGTGA 831 0.3851 MENENLAHGGRGKVIDELLRGHGLANQLRNILNESGDIDNNDGSTIPFAEDLLKEVLTTFTNSLLFLNNNPTSEGSDLQLTKSEDSFESNCKSTSIVKERRGCYKRRKVSQTWEKESENPEEDGHQWRKYGQKKILHTDFPRNYYRCTHKHDQGCKATKQVQRIQEDPPLHKTTYSGLHTCRTLQNPEIIVDYPTDHSSMFLSFDNSFPTPAKQDCPFLSVKKEECKEEVVHPLSGLTFDDPEKDVTLSSTLDSHDHLGVNIPDIMYDDVLNWPLS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01967 276 SMART WRKY_cls 121 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g01967 276 Pfam WRKY DNA -binding domain 122 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g01967 276 SUPERFAMILY WRKY DNA-binding domain 119 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g01967 276 Gene3D WRKY domain 104 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g01967 276 ProSiteProfiles WRKY domain profile. 116 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g01967 276 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 18 206 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01967 Mepo-Chr3 28948023 28950999 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01967 13 197 WRKY Transcription Factor Family AT3G56400 41.414 4.38e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo3g01967 WRKY 5.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01967 - - gmx:100170682 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01967 3 28948023 28950999 Mepo3g01967 3 28948023 28950999 ECH
Mepo3g01967 3 28948023 28950999 Mepo1g04751 1 55566719 55567967 PCT