Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01966 ATGAAAAATGAAAATCTAGCTCATGGTAGTGGTCGTGGAAAAGTAATTGATGAATTACTAAGAGGGCGTGAACTTGCAAACCAACTAAAAAATATTCTGAATGAAAGTGGTGATATTGATAATATTAATGGATCAACAACACCATTTGCTGAAGATCTTTTAAAGAAAGTGCTTACAACCTTTACTAATTCTCTCTTGTTCTTGAACAATAATTCTACTTCAGAAGGCTCTGATTTGCAACTCACCAAATCTGAAGATTCTTTAGAGAGTAATTGCAAGAGTACTTCCATTGTTAAGGAACGTAGAGGCTGTTACAAAAGAAGAAAAGTTTCACAATCATGGGAGAAGGAGTCTGAACGTCTCGTGGAAGATGGTCATCAATGGAGAAAGTATGGTCAAAAAAAGATCTTGCACACCGATTTCCCAAGGAACTATTACAGGTGCACTCACAAACATGATCAAGGTTGCAAAGCAACAAAACAAGTGCAACAAATTCAAGAGGATCCACCTCTTTACAAAACAACCTACTATGGCCATCACACTTGTAGAATCTTGCAAAGCCCTGAGATCATAGTGGATTCTCCTTCTGACAACTCTTCCATGTTCCTTAGCTTTGACAACTCTTTCCCAACTCCAGCCAAACAAGATTGCCCTTTTCTCTCATCTTCTTATCCATCAACATCATCATCAGTGAAAAAGGAGGGTTGCAAGGAAGAGATTGTTCACCCTCCTCCTTCAAATGATTACCTCTCTGGACTAACTTTTGATGATCCAGAAAAGGATGTCACACTATCATCAACACTTGATTCTCATGATCATTTAGGTGTCAACATTCCTGATATCATGTATGATGATGTCCTTAATTGGCCTCTTTCTTGA 879 0.38 MKNENLAHGSGRGKVIDELLRGRELANQLKNILNESGDIDNINGSTTPFAEDLLKKVLTTFTNSLLFLNNNSTSEGSDLQLTKSEDSLESNCKSTSIVKERRGCYKRRKVSQSWEKESERLVEDGHQWRKYGQKKILHTDFPRNYYRCTHKHDQGCKATKQVQQIQEDPPLYKTTYYGHHTCRILQSPEIIVDSPSDNSSMFLSFDNSFPTPAKQDCPFLSSSYPSTSSSVKKEGCKEEIVHPPPSNDYLSGLTFDDPEKDVTLSSTLDSHDHLGVNIPDIMYDDVLNWPLS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01966 292 Gene3D WRKY domain 106 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g01966 292 Pfam WRKY DNA -binding domain 123 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g01966 292 SUPERFAMILY WRKY DNA-binding domain 120 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g01966 292 ProSiteProfiles WRKY domain profile. 117 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g01966 292 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 18 207 IPR044810 GO:0003700
Mepo3g01966 292 SMART WRKY_cls 122 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01966 Mepo-Chr3 28941561 28943523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01966 14 182 WRKY Transcription Factor Family AT3G56400 41.209 1.17e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo3g01966 WRKY 1.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01966 - - gmx:100805895 315.079