Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01962 ATGTTTCATTCTGTGAAAATGATGAAATTCAGCAGCATATGTTGGTTGTTTTTGATTGTTTTTGCTTCAGTTATGGTACCAGTGTTTTCTGTTGATGATCCTGTTTTCAATGATGATATATTGGGGTTGATTGTTTTCAAAGCTGGTTTACAAGACCCTAAACACAAACTCTCATCATGGAATGAAGATGATTACACTCCTTGTAATTGGGAAGGTGTGAAATGTGATTCTTCAAACAATAGAGTCTCTTCTGTTGTACTTGATGGATTCTCTCTTTCAGGTCACATTGATAGAGGTTTGTTGAGATTGCAGTTTCTTCAAACTCTCTCACTTTCTGGTAACAATTTCACAGGTTTCATAAACCCTGATCTTCCTAAACTTGGAAGTTTGCAAGTTGTTGACTTTAGTGATAACAATCTTAAAGGGTCAATTCCTGAAGGGTTTTTTCAACAATGTGGATCTTTGAAAACTGTTAACTTTGCTAAGAATAATCTTACAGGTAACATTCCTGTTTCTCTTAGCACTTGTAACACTTTGACAAATGTTAACTTTTCGTATAATCAAATTGATGGAAAATTGCCATCTGAGGTGTGGTTTTTGAGGGGATTACAGTCACTTGATGTTTCAAATAACTTGCTTGATGGAGAAATTCCTGAGGGGATTCAAAATCTTTATGATATGAGAGAGTTGAGTTTGAAGAAAAACCGATTTAGTGGTAGAATTCCTCAGGATATTGGTGGCTGCATTGTTTTGAAATCACTTGATTTGAGTGGTAATTTGCTCTCTGGTGGAATTCCACAATCAATGCAAAGACTCAATTCTTGTAACTCTCTCAGTTTGCAAGGAAACTCATTCACAGGTAACATTCCTGATTGGATTGGTGAGTTGAAAGATCTAGAAAATTTGGATCTTTCTGCTAATAGATTTTCTGGTTGGATTCCAAAGTCATTAGGAAATCTTGACATGCTGCAAAGATTGAATTTTTCTAGGAATCAGTTAACCGGAAACTTGCCGGATTTGATGATAAATTGTACTAAGCTTTTGGCTCTTGATATCAGTCACAATCAATTGAATGGTTATCTTCCTTCATGGATTTTTAGGAACGGTAACTATCATGGTCTTGAGGTTTTGGATTTGTCTTCAAATTCATTTTCTGGTGAAATTCCATCTGATATTGGTGGTCTTAGTAGTTTAAAAATCTGGAATATGTCTACCAACTATTTCTCTGGTTCTGTTCCTGTTGGTATAGGTGAACTCAAATCTTTATTCATTGTTGATTTGAGTGATAACAAGCTTAATGGAAGCATTCCTTTTGAATTAGAAGGTGCGATTTCGCTTAGTGAATTGAGGCTACAGAAGAATTCCATTGATGGGAGAATTCCAGATCAAATCGCGAAGTGCTCGGCTCTAACATCTTTGGATCTCTCTCACAACAAGCTGACTGGTTCAATCCCTGGAGCCATTGCAAACCTAACCAATCTTCAGCATGTAGACTTGTCATGGAATGAACTCTCTGGAACTTTGCCGAAGGAACTGACAAATCTTTCCAATCTTTTATCGTTTGATGTATCCTACAATCACCTTCAAGGTGAGTTACCGGTCGGTGGTTTCTTCAACACCATCCCCTCCTCATCAGTTACCGGTAACTCATTGCTGTGCGGTTCTGTTGTCAACCACTCCTGTCCATCAGTTCATCCGAAACCTATTGTCCTCAATCCCAATTCTTCTGCTTCCAACTCCAGCGTTCCGTCAAATTATCATCGACACAAGATCATACTCAGCATATCTGCTCTTGTTGCTATTGGTGCAGCTGCTTTAATTGCCATTGGTGTCGTTGCTATCACTTTCCTAAATATGCGCGCGCGTTCTGCAATAGAACGTTCTGCTGTCCCGTTTGCATTCTCTGGTGGTGAGGACTATAGCAACTCACCGGCGAATGATCCAAACTATGGCAAGCTTGTCATGTTTTCTGGTGATGCAGACTTTGCTGATGGCGCACACAATCTACTTAATAAAGATAGTGAAATAGGCCGCGGTGGATTTGGAGTTGTTTATCGCACGTTTCTTCGAGACGGGCATGCTGTTGCGATTAAGAAGCTTACAGTCTCAAGTTTGATCAAATCCCAAGATGAATTCGAGAAGGAAGTGAAAAGGTTTGGGAAGATTCAGCACCAGAATCTTGTAGCACTCGAAGGCTATTACTGGACTTCATCGTTGCAGCTCCTCATTTACGAGTACCTATCAAGTGGTAGTTTACATAAGCTGCTACATGATGCTAACAACAAAAATGTCTTATCCTGGCGACAAAGGTTCAAGATTATTCTCGGTATGGCAAAAGGGTTGGCACATTTGCATGAAACAAACATAATCCACTATAATCTTAAATCAACCAATGTTCTTATCGACTCTTCTGGCGAGCCCAAGATAGGAGATTTCGGTTTGGTGAAGCTCTTACCAATGCTGGACCATTGTGTGTTGAGCAGCAAAATTCAAAGTGCGCTCGGGTACATGGCTCCCGAGTTTGCTTGTCGCACAGTTAAGATAACCGAGAAATGTGATGTGTACGGTTTCGGGATCTTGATTTTGGAGATAGTGACAGGAAAAAGACCTGTGGAATACATGGAGGATGATGTGGTGGTTCTTTGTGACATGGTGAGGGGTGCATTGGAAGAAGGAAATGTCGAGCATTGTGTTGATGAAAGACTTTTAGGTAATTTTGCAGCTGAAGAAGCAATTCCTGTGATAAAATTAGGGTTGATTTGTGCATCACAAGTGCCATCAAATAGGCCTGATATGAGTGAGGTGATCAACATATTAGAGTTAATTCAGTGCCCTTCAGAAGGACAAGAGGAATTAATAGAATGA 2865 0.3955 MFHSVKMMKFSSICWLFLIVFASVMVPVFSVDDPVFNDDILGLIVFKAGLQDPKHKLSSWNEDDYTPCNWEGVKCDSSNNRVSSVVLDGFSLSGHIDRGLLRLQFLQTLSLSGNNFTGFINPDLPKLGSLQVVDFSDNNLKGSIPEGFFQQCGSLKTVNFAKNNLTGNIPVSLSTCNTLTNVNFSYNQIDGKLPSEVWFLRGLQSLDVSNNLLDGEIPEGIQNLYDMRELSLKKNRFSGRIPQDIGGCIVLKSLDLSGNLLSGGIPQSMQRLNSCNSLSLQGNSFTGNIPDWIGELKDLENLDLSANRFSGWIPKSLGNLDMLQRLNFSRNQLTGNLPDLMINCTKLLALDISHNQLNGYLPSWIFRNGNYHGLEVLDLSSNSFSGEIPSDIGGLSSLKIWNMSTNYFSGSVPVGIGELKSLFIVDLSDNKLNGSIPFELEGAISLSELRLQKNSIDGRIPDQIAKCSALTSLDLSHNKLTGSIPGAIANLTNLQHVDLSWNELSGTLPKELTNLSNLLSFDVSYNHLQGELPVGGFFNTIPSSSVTGNSLLCGSVVNHSCPSVHPKPIVLNPNSSASNSSVPSNYHRHKIILSISALVAIGAAALIAIGVVAITFLNMRARSAIERSAVPFAFSGGEDYSNSPANDPNYGKLVMFSGDADFADGAHNLLNKDSEIGRGGFGVVYRTFLRDGHAVAIKKLTVSSLIKSQDEFEKEVKRFGKIQHQNLVALEGYYWTSSLQLLIYEYLSSGSLHKLLHDANNKNVLSWRQRFKIILGMAKGLAHLHETNIIHYNLKSTNVLIDSSGEPKIGDFGLVKLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILILEIVTGKRPVEYMEDDVVVLCDMVRGALEEGNVEHCVDERLLGNFAAEEAIPVIKLGLICASQVPSNRPDMSEVINILELIQCPSEGQEELIE 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01962 954 FunFam Inactive leucine-rich repeat receptor-like protein kinase 195 291 - -
Mepo3g01962 954 SMART LRR_sd22_2 200 223 - -
Mepo3g01962 954 SMART LRR_sd22_2 296 322 - -
Mepo3g01962 954 SMART LRR_sd22_2 491 517 - -
Mepo3g01962 954 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Mepo3g01962 954 Gene3D Ribonuclease Inhibitor 274 564 IPR032675 -
Mepo3g01962 954 FunFam Leucine-rich repeat receptor-like protein kinase PXC2 368 564 - -
Mepo3g01962 954 FunFam Leucine-rich repeat receptor-like protein kinase 36 194 - -
Mepo3g01962 954 Pfam Leucine Rich Repeat 251 271 IPR001611 GO:0005515
Mepo3g01962 954 Pfam Leucine Rich Repeat 374 395 IPR001611 GO:0005515
Mepo3g01962 954 Pfam Leucine Rich Repeat 106 127 IPR001611 GO:0005515
Mepo3g01962 954 Pfam Leucine Rich Repeat 203 224 IPR001611 GO:0005515
Mepo3g01962 954 Pfam Leucine rich repeat 445 504 IPR001611 GO:0005515
Mepo3g01962 954 Pfam Leucine rich repeat 299 357 IPR001611 GO:0005515
Mepo3g01962 954 Gene3D Phosphorylase Kinase; domain 1 659 746 - -
Mepo3g01962 954 ProSiteProfiles Protein kinase domain profile. 670 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01962 954 SUPERFAMILY RNI-like 265 530 - -
Mepo3g01962 954 SUPERFAMILY L domain-like 54 365 - -
Mepo3g01962 954 Gene3D Transferase(Phosphotransferase) domain 1 747 951 - -
Mepo3g01962 954 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 747 948 - -
Mepo3g01962 954 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 313 940 - -
Mepo3g01962 954 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 664 746 - -
Mepo3g01962 954 CDD STKc_IRAK 676 942 - -
Mepo3g01962 954 FunFam LRR receptor-like serine/threonine-protein kinase 294 367 - -
Mepo3g01962 954 SMART LRR_typ_2 296 319 IPR003591 -
Mepo3g01962 954 SMART LRR_typ_2 515 539 IPR003591 -
Mepo3g01962 954 SMART LRR_typ_2 371 395 IPR003591 -
Mepo3g01962 954 SMART LRR_typ_2 467 490 IPR003591 -
Mepo3g01962 954 SMART LRR_typ_2 419 443 IPR003591 -
Mepo3g01962 954 SMART LRR_typ_2 200 223 IPR003591 -
Mepo3g01962 954 SMART LRR_typ_2 491 514 IPR003591 -
Mepo3g01962 954 SMART LRR_typ_2 345 368 IPR003591 -
Mepo3g01962 954 SMART LRR_typ_2 127 151 IPR003591 -
Mepo3g01962 954 SMART LRR_typ_2 320 344 IPR003591 -
Mepo3g01962 954 SMART LRR_typ_2 224 248 IPR003591 -
Mepo3g01962 954 ProSiteProfiles Leucine-rich repeat profile. 469 492 IPR001611 GO:0005515
Mepo3g01962 954 ProSitePatterns Protein kinases ATP-binding region signature. 676 699 IPR017441 GO:0005524
Mepo3g01962 954 Pfam Protein kinase domain 671 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01962 954 Gene3D Ribonuclease Inhibitor 41 150 IPR032675 -
Mepo3g01962 954 Gene3D Ribonuclease Inhibitor 151 223 IPR032675 -
Mepo3g01962 954 Gene3D Ribonuclease Inhibitor 224 273 IPR032675 -
Mepo3g01962 954 PRINTS Leucine-rich repeat signature 491 504 - -
Mepo3g01962 954 PRINTS Leucine-rich repeat signature 470 483 - -
Mepo3g01962 954 SUPERFAMILY Protein kinase-like (PK-like) 671 943 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01962 Mepo-Chr3 28856113 28859929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01962 12 950 Receptor kinase-like Gene Family AT5G01890 60.475 0.0 1134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Mepo3g01962 Pkinase 6.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01962 - - mtr:11433630 1800.79