Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01956 ATGGGGTGTTTCACTGTATTGAAGAGCAAGAAGAAGAAGTCTGATTCTTTTGCCTATGTAAAACGCATAAGCCATAATGAGCACGCGCCTTCAGTACTTCCTGAACCTCAAACTCACACTCGCTCACTACAGTCTGCACCTCCTAGTTTCAGGACCAGAGGGAAACCCATTCAATCTGTTAATAAAGTAACTAACAATAGAATACGCGCATTATCTGCTCCATCGACTCTTGATGTAGCAGACCAAGATGCTTTGGCCTCAATTGAGTACGAGGAACAAGAAGAGTTAAAACACCGAGGAGGAGGATCAATGAAGGAGCTGCGTTCTTCTAGTCCACAACCTTTACCACTTCCTTCTCCTCAGGGATGTAGTTCACTGAAGGCTATCGGCAGCTTTAAGTTGGGGACAGCTAGTGGTCCTCTACATGCTTCTGGACCTTTGCCGCTTCCTCCTACCGGTTCACTTCGGAACTTTCCGTATGAGGAAGTTGCTGCTGCTTGCCACAATTTCTCTTCTGATCGATGCATGTCAGAATGTCTTTCTTCCACCATATATAAAGCTTACTTTGGTGATGATCCTTCAAATTCAAAGAAGTTTGAAGCCACTGTCACACGTCTTCACCCATCATCTCAGGGATTGAAGGAATTCATAAACGAGGTTAATACTCTCGCAACTTTGCAACATCCAAACCTCTGTAAATTGCTAGGATTTCATGCACGTGATGGATCAGAACACAAAATGTTAGTCTATGAGAGGCTATACCATGGAAGCTTGGACCGCCTTTTGTATGGTAGATCTGATGGACCATCAATTGATTGGAATACAAGAATGAAAATTGCAATGTGTGCTGCCCATGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTTCAGGCAATGTATAATGAGTTCTCAACAGCCAACATACAGATCGACAAAGATTTCAGTGCTAAGCTTTCTGGATATGGTTGTGTTGGTCATATTCCCGAGGAAGAGATTTCCAGCAGTTCATCTGCTGTTGGAAACTTGTCAATGGAGACACTGGAGAAAGGAATGCTGACCCCCAAAAGCAATGTGTGGAGCTTTGGAATTTTTCTTTTGGAGTTACTTACTGGAAGAAAGAATCTTGATAGCCGTCACCCTAAGGAAGAGAGGAATTTAGTCAAATGGAGCAAGCCTTTCCTGGCCGATAGTTATCGTTTATCGCTGATCATGGACCCTCAACTTAAAGGCCGCTTTCCTTCTAAAGCAGCAAGAACAATAGCCGACATTGCACAAAAATGCCTTCAAAAGGAGCCATCAGATAGACCCACCATGAGAACTGTCGTTGAGCATCTCAAAACGATACAGGATTTGAAGTACTCTTGCAGGTTTCCACTGCAAGAACCAGCGCCATTATCTGGAAAGGAAATGTTGCGATCACCAAGTCTTAATGGTATCATTTGCCCTGCGCCAAGGTTGAGTTACTCTCCATCTCGGCCATCGGTAGCCCCGATACCAATTTCACCTCCAAGATGGTCCGGGGTGCCCGTCCTTCCACCTCGAGCTTGTTCTTCTACTCTCTCATTGGTAGAGCTTGATAGGCAAGAAAGCCGCAAGTCATCATCCTCAGCCTCCAGGAGGGCCAGTGTTGAAGGATTTTGA 1641 0.4479 MGCFTVLKSKKKKSDSFAYVKRISHNEHAPSVLPEPQTHTRSLQSAPPSFRTRGKPIQSVNKVTNNRIRALSAPSTLDVADQDALASIEYEEQEELKHRGGGSMKELRSSSPQPLPLPSPQGCSSLKAIGSFKLGTASGPLHASGPLPLPPTGSLRNFPYEEVAAACHNFSSDRCMSECLSSTIYKAYFGDDPSNSKKFEATVTRLHPSSQGLKEFINEVNTLATLQHPNLCKLLGFHARDGSEHKMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAMCAAHGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSKPFLADSYRLSLIMDPQLKGRFPSKAARTIADIAQKCLQKEPSDRPTMRTVVEHLKTIQDLKYSCRFPLQEPAPLSGKEMLRSPSLNGIICPAPRLSYSPSRPSVAPIPISPPRWSGVPVLPPRACSSTLSLVELDRQESRKSSSSASRRASVEGF 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01956 546 Gene3D Transferase(Phosphotransferase) domain 1 253 456 - -
Mepo3g01956 546 SUPERFAMILY Protein kinase-like (PK-like) 149 457 IPR011009 -
Mepo3g01956 546 MobiDBLite consensus disorder prediction 25 55 - -
Mepo3g01956 546 ProSiteProfiles Protein kinase domain profile. 170 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01956 546 PANTHER OS01G0588500 PROTEIN-RELATED 102 449 - -
Mepo3g01956 546 MobiDBLite consensus disorder prediction 93 122 - -
Mepo3g01956 546 Pfam Protein tyrosine and serine/threonine kinase 184 445 IPR001245 GO:0004672|GO:0006468
Mepo3g01956 546 Gene3D Phosphorylase Kinase; domain 1 151 251 - -
Mepo3g01956 546 MobiDBLite consensus disorder prediction 31 55 - -
Mepo3g01956 546 MobiDBLite consensus disorder prediction 522 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01956 Mepo-Chr3 28820627 28824348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01956 149 449 Receptor kinase-like Gene Family AT4G02010 37.785 4.61e-55 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Mepo3g01956 PK_Tyr_Ser-Thr 5.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01956 - - gmx:100809117 943.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01956 3 28820627 28824348 Mepo2g00527 2 6263649 6268941 PCT