Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01955 ATGAAACGCCGTTTTCTTGACACGGAGATGAGCATGCCACCATCATACGAAAACAACACAAGGGGTGACTCATTCATCAACGTCGAAAATTTCGACACAAACATGGTGATTATATTAGCAGCACTATTATGTGCATTGATATGTGCTCTAGGGCTAAACACCATAGCTCGCTGCGCCATGCGGTGCAGCCGAAGATTATCCGAAGAAACACCGGAACAAGGCACGGTGAGGCTGAACAAAACTGGACTGAAAAAGCGTGAGCTGAGTCAAATTCCGGTGACGGTTTACAGTGGTGCCGGAGAGGATATTCCGGCGACGGAGTGTCCTATTTGTTTAGGAGAGTTTGAGAAAGGTGACAAAGTTCGAATGTTACCAAAGTGTAATCACGGGTTTCATGTTAGGTGTATTGACACGTGGTTGGTGTCACATTCTTCGTGTCCAAATTGTAGGAATTCACTTCTTGTTGAGAGAGAATCCAAAGATGGGGTTGCCGGAGATGGGTTGCCGGAAAATGCTGCGGCGGTGGTAGTTGAGGTGAGTTGA 543 0.4678 MKRRFLDTEMSMPPSYENNTRGDSFINVENFDTNMVIILAALLCALICALGLNTIARCAMRCSRRLSEETPEQGTVRLNKTGLKKRELSQIPVTVYSGAGEDIPATECPICLGEFEKGDKVRMLPKCNHGFHVRCIDTWLVSHSSCPNCRNSLLVERESKDGVAGDGLPENAAAVVVEVS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01955 180 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 159 IPR013083 -
Mepo3g01955 180 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Mepo3g01955 180 SUPERFAMILY RING/U-box 107 155 - -
Mepo3g01955 180 CDD RING-H2_EL5-like 107 150 - -
Mepo3g01955 180 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 25 156 - -
Mepo3g01955 180 SMART ring_2 108 149 IPR001841 -
Mepo3g01955 180 Pfam Ring finger domain 107 150 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01955 Mepo-Chr3 28799680 28800614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01955 1 164 C3H Transcription Factor Family AT3G10910 52.907 1.41e-56 174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01955 3 28799680 28800614 Mepo3g01955 3 28799680 28800614 ECH