Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01949 ATGTACAAGGGGAGATTTTGCACTTCTGGTGGGATTAAAGCCCCCCTTGGATATGTTGAAACCGATCCATCTGGTCGATATGGACGTTTCAAGGACATTCTCGGCACAGGAGCTATGAAAACTGTATATAGAGCATTTGATGAGTTCCTTGGGATTGAAGTGGCTTGGAACCAAGTCAAACTTGGTGATGTTTGTCATTCACCAGAGCAACTTCAACGACTTTATTCAGAGGTTCATCTCCTTAAGCACCTCGACCATAAATCCATGATGATCTTCTATGGTTCTTGGATTGATATCAATGGCAAAACATTCAACTTCATCACTGAATTGTTCACCTCAGGCACCCTTAGAGAGTATAGGCAGAAGTATAAGAAAGTGGATAATCAAGCACTAAAAAATTGGGCACGGCAGATTCTAAGTGGTTTGGAATATTTACACAACCATAATCCACCTGTGATACATAGAGACCTCAAATGTGATAATATCTTTGTCAATGGCCATAAAGGAGAGGTCAAGATTGGTGACTTAGGTCTTGCAGCAATACTTGTTAGATCCCAACTTGCTCAAAGTGTCATAGGCACTCCAGAGTTCATGGCACCAGAATTGTACGAAGAGAAATACAATGAACTAGTAGATATATATTCCTATGGGATGTGTATGATAGAGATGCTTACTCTTGAGTTTCCATACAATGAGTGCTCCAACCCAGCTCAAATATACAAGAAAGTAACCGCGGGGAAGCTACCAAATGCATTTTTCAGAATCAAAGATTCAGAAGCACAAAGGTTTGTGGGAAGATGTTTGGCACATGTCTCAAAGAGACCATCAGCAAAGGAACTATTGTTGGACCCCTTTTTAGCCACGGAACAATTTGAATTGTCATTGCCAAACACAACATTATCTAAAAATCAAACATTAAAGCATTTTTCTCTAGGTGATTCAACAACAAGTACAAATATGACGATCACTGGATCCCTAAGTGAAGAGGATAACACAATTTTCCTTAAAGTGAGGATATGTGATGAAATAGGACAAACAAGGCATATATTCTTTCCATTTGATACAAAAAACGACACTGCTATTAAAGTGGCAATGGAGATGGTAGAAGAACTTGAAATAAGACACTTGGAACCATTAGAGATTGCTGCAATGATAGATAATGAGATATCAACTTTATTTCCAACTTGGATGGGAACTCATGGCAAGTGTGAGCATCAATTACAACATAGCTTTAGCTATGTAGAAGATGAGGATGTTAACAACCATAACCCTTTTGTCTTATCATCATCTTGTCCTTCTTCCCCTCATGATTCTCTCACTAAGTCTCACTCCAAGGCCCACTTCTGTGCAAAGCATAGCATGTTTCCTCAAGAATGGAATCAAGGTAATTTTACTTATAAAACACAGGTAAATATGGTAAATGATCTGTTTCAAATTTATGAACCATATGTGTATTTTGTAGATTTATATATAAATGATGATGGAAGCTCTCCAAGCTCAATGAACTCCTACAAATGTTCAAATATCCAATATCATGAAGATGAGCATTGCCCAACAATAGTAGAAGAAGCTAGAGCCAAACATAACAATCTAAAATGCATTAGATCAAGTCATATAGAAGAGGAAGAAAAAAGTAATTTCGCCAAATATTTTTTGCACCCAAAAATGGACTCTTGTAATGATTGTAGATGTGGTGGCCATGGGACGAGCCATCACGGATGGTCGAGGAGACCAAAAAATCGTTCAAACATGGAGGAGCATAGGAGCTTGCAGCTTCATCGACCGCAACTATTGGAAGAGGTGTACAAGAGACCGATGTTCAACACAATTGCCACTATGGAAGGCATTGGATTTCAATATCCAAAGAGAGGAGGAAGTCGTACTCGCTAA 1890 0.3868 MYKGRFCTSGGIKAPLGYVETDPSGRYGRFKDILGTGAMKTVYRAFDEFLGIEVAWNQVKLGDVCHSPEQLQRLYSEVHLLKHLDHKSMMIFYGSWIDINGKTFNFITELFTSGTLREYRQKYKKVDNQALKNWARQILSGLEYLHNHNPPVIHRDLKCDNIFVNGHKGEVKIGDLGLAAILVRSQLAQSVIGTPEFMAPELYEEKYNELVDIYSYGMCMIEMLTLEFPYNECSNPAQIYKKVTAGKLPNAFFRIKDSEAQRFVGRCLAHVSKRPSAKELLLDPFLATEQFELSLPNTTLSKNQTLKHFSLGDSTTSTNMTITGSLSEEDNTIFLKVRICDEIGQTRHIFFPFDTKNDTAIKVAMEMVEELEIRHLEPLEIAAMIDNEISTLFPTWMGTHGKCEHQLQHSFSYVEDEDVNNHNPFVLSSSCPSSPHDSLTKSHSKAHFCAKHSMFPQEWNQGNFTYKTQVNMVNDLFQIYEPYVYFVDLYINDDGSSPSSMNSYKCSNIQYHEDEHCPTIVEEARAKHNNLKCIRSSHIEEEEKSNFAKYFLHPKMDSCNDCRCGGHGTSHHGWSRRPKNRSNMEEHRSLQLHRPQLLEEVYKRPMFNTIATMEGIGFQYPKRGGSRTR 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01949 629 Gene3D Phosphorylase Kinase; domain 1 14 109 - -
Mepo3g01949 629 FunFam probable serine/threonine-protein kinase WNK9 111 291 - -
Mepo3g01949 629 CDD STKc_WNK 26 286 - -
Mepo3g01949 629 Gene3D Transferase(Phosphotransferase) domain 1 111 292 - -
Mepo3g01949 629 SMART serkin_6 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01949 629 ProSiteProfiles Protein kinase domain profile. 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01949 629 MobiDBLite consensus disorder prediction 570 591 - -
Mepo3g01949 629 SUPERFAMILY Protein kinase-like (PK-like) 30 287 IPR011009 -
Mepo3g01949 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Mepo3g01949 629 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 18 601 - -
Mepo3g01949 629 Pfam Protein kinase domain 31 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01949 629 FunFam Probable serine/threonine-protein kinase WNK1 13 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01949 Mepo-Chr3 28650486 28654190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01949 16 418 MAP Kinase Kinase Kinase AT3G51630 64.976 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mepo3g01949 Pkinase 5.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01949 K08867 - gmx:100272206 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01949 3 28650486 28654190 Mepo3g01949 3 28650486 28654190 ECH
Mepo3g01949 3 28650486 28654190 Mepo2g00849 2 10830277 10836355 PCT