Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01944 ATGGCGAATGAAGAGTCAACAAACGGCGTCGTTTTGTTTGGGAAATACGAAATTGGAAGATTATTAGGTGTTGGTGCATCAGCGAAGGTGTATCATGCGACCAACATTGAAACAGGGAAGAGCGTAGCGGTGAAAGTGATAAGCAAGAAGAAACTCATCAATGGAGAATTCGCTGCTAACATTGAACGTGAGATCTCAATTCTCCGTCGTCTTCATCACCCGAATATTATCGATCTCTTCGAAGTCCTGGCTTCGAAGAGTAAAATCTACTTCGTCGTGGAGTTCGCTGAAGCTGGTGAACTCTTCGAAGAAGTAGCGAAGAATGAAAAGCTGACAGAAGATCATGCAAGAAGATACTTCCGGCAACTTATCTCCGCCGTGAAACACTGTCACTCTCGCGGTGTTTTCCACCGTGATCTTAAATTGGATAATCTTTTACTTGATGAGAATGATAATCTCAAAGTAACGGATTTCGGGTTAAGCGCGGTTAAAAAACAGATCCGACCCGACGGGTTGCTTCACACGGTTTGTGGTACGCCGTCCTACGTGGCACCGGAGATTCTTGCAAAGAAAGGCTATGATGGTGCGAAAGCTGATGTTTGGTCTTGCGGCGTTGTTTTATTTACCGTTACTGCTGGGTATTTACCGTTTAATGATTATAATATTACTGTGCTTTATAGAAAAATTTACCGTGGTCAATTTCGGTTTCCCAAATGGATGTCATGTGATCTGAAGAATCTCTTATCACGTATGTTGGATACAAATCCCAAGACAAGGATAAGTGTTGATGAGATTCTTGAAGACCCATGGTTTAGCTTGGGTGGATATAAGTTAGACCGAGTTTTAGTTAAGACTGAAATGGAGGAGAGTCGGACTGGGTTTAAATCATTAAACGCGTTTGACTTGATATCATTTTCAACTGGGCTAGATATGTCAGGTATGTTCGAGGAAAATGTAGGGTTGAGTTTAGTGGAGCGGATTGTTTCGGCCAAGCTACCAGAGAGGATTGTGGAGAGGGTGGAGGAGATAGTGGAGGGGACTAAGGTGGTGGTGAAAAGATTGAAGAATGGTGGTGGAGCAAAGTTGGAAGGGCAAGAAGGTAATTTGATTGCTCTTGTTGTGATTTACCGGTTAACGGATGAATTGGTTGTTGTTGAAATGAAGAAGCGTGGAAAAGGGGATGAATATAACGCGCAATTGTGGAAAAATAAATTGCGACCTTTGCTTGTTGAGTTGGCTGAAAAACAGGAAGTACCGGTTTCTCGGTAA 1269 0.4279 MANEESTNGVVLFGKYEIGRLLGVGASAKVYHATNIETGKSVAVKVISKKKLINGEFAANIEREISILRRLHHPNIIDLFEVLASKSKIYFVVEFAEAGELFEEVAKNEKLTEDHARRYFRQLISAVKHCHSRGVFHRDLKLDNLLLDENDNLKVTDFGLSAVKKQIRPDGLLHTVCGTPSYVAPEILAKKGYDGAKADVWSCGVVLFTVTAGYLPFNDYNITVLYRKIYRGQFRFPKWMSCDLKNLLSRMLDTNPKTRISVDEILEDPWFSLGGYKLDRVLVKTEMEESRTGFKSLNAFDLISFSTGLDMSGMFEENVGLSLVERIVSAKLPERIVERVEEIVEGTKVVVKRLKNGGGAKLEGQEGNLIALVVIYRLTDELVVVEMKKRGKGDEYNAQLWKNKLRPLLVELAEKQEVPVSR 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01944 422 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Mepo3g01944 422 ProSiteProfiles Protein kinase domain profile. 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01944 422 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 9 398 - -
Mepo3g01944 422 ProSiteProfiles NAF domain profile. 292 316 IPR018451 GO:0007165
Mepo3g01944 422 Pfam Protein kinase domain 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01944 422 FunFam CAMK family protein kinase 11 302 - -
Mepo3g01944 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Mepo3g01944 422 SUPERFAMILY Protein kinase-like (PK-like) 12 272 IPR011009 -
Mepo3g01944 422 Gene3D Transferase(Phosphotransferase) domain 1 8 297 - -
Mepo3g01944 422 SMART serkin_6 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01944 422 Gene3D Kinase associated domain 1, KA1 298 413 - -
Mepo3g01944 422 FunFam Aurora kinase A 10 99 - -
Mepo3g01944 422 Pfam NAF domain 295 352 IPR004041 GO:0007165
Mepo3g01944 422 CDD CIPK_C 298 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01944 Mepo-Chr3 28579230 28580831 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01944 1 415 CBL-interacting serine-threonine protein kinases AT2G30360 55.425 2.04e-166 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mepo3g01944 Pkinase 1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01944 - K12761 gmx:100788245 587.03