Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01939 ATGGAACCGAAGGGAAGTGTGCTTATGCAAAGATATGAGCTTGGAAGATTATTAGGCCAAGGAACGTTTGCGAAGGTCTACCATGCTAGGAACCTTATAACTGGCGTAAGTGTGGCCATTAAGGTAATTGATAAAGAAAAGGTTTACAAAGTTGGTATGGTTGATCAAATTAAGCGTGAAATTTCAGTGATGAGATTAGTCAGACACCCGAATGTGGTTGAGCTTTACGAGGTAATGGCTAGTAAAACCAAAATTTTCATTGTTATGGAGTATGCAAGAGGCGGTGAGCTTTTCCACAAGATAGCAAAAGGGAAGCTCAAGACAGATGTTGCTAGGAGATATTTCCAGCAGCTGGTTAGCGCAGTTGACTACTGCCACAGCAGGGGTGTGTATCATCGAGATTTGAAACCTGAAAATCTACTATTGGATGAGAATGAAAATTTGAAGGTTTCAGATTTTGGTTTGAGTACACTTTCTGAAACTAAGAGCCAAGATGGATTACTCTACACTACATGTGGTACGCCTGCGTATGTTGCTCCGGAAGTGATAAACCGAAAGGGTTACGATGGGAGTAAAGCTGATATATGGTCGTGCGGAGTAATCTTGTATGTTCTATTGGCCGGTTATCTTCCATTCCATGATCAAAATCTGATGGAGATGTACAGGAAAATCGGTAAAGGGGAATTCAAATTTCCTAAATGGTTTGCACCAGAGGTTCGCCGGTTGTTGTCCAAAATATTGGATCCAAGTTTAAAGACTCGGATATCAATGGCCAAGATCATGGAAAATTCTTGGTTTAAAAAAGGATTAGAGAAGCCCGTTGTCATCGAGACTGAAAACAGCGAACTTACTTCTCTCCACGCTGAAGGAGTGTTTGAAGTATCCGAGAACGGTGGTGATTCTAATACGGAGACAAAACAACAGGCGAAGCCTTGCAACAACTTAAACGCCTTTGATATCATCTCCTTCTCATCCGGTTTTGATTTATCCAGTTTGTTCGAAGACAGAATTCAAAAGAAAGAGATGCGGTTTACGTCTAACAAGCCTGCATCAACTATAATCTCCAAGCTGGAAGAGATTTGCAAGTGTCTTCAATTGAAAGTAAAGAAAAAAGATGGAGGTTTGTTAAAGTTGGAAGGATCAAAGGAAGGAAGGAAAGGGATTCTGAACATTGATGCCGAGATTTTCGAGATTACTCCTCACTTCCATCTTGTGGAACTTAAAAAGTCTGATGGGGATACAGTGGAGTATGAGAAGCTTATGCAACAGGAGATTAGACCAGCACTTAAGGACATTGTGTGGAACTGGCAAGGAGAACAACCTCAGAAACTCCAACAGGAAGTAGTGCAAAAGGAGCAACAAACATCTATTACAGCTCAAATTTGA 1386 0.4098 MEPKGSVLMQRYELGRLLGQGTFAKVYHARNLITGVSVAIKVIDKEKVYKVGMVDQIKREISVMRLVRHPNVVELYEVMASKTKIFIVMEYARGGELFHKIAKGKLKTDVARRYFQQLVSAVDYCHSRGVYHRDLKPENLLLDENENLKVSDFGLSTLSETKSQDGLLYTTCGTPAYVAPEVINRKGYDGSKADIWSCGVILYVLLAGYLPFHDQNLMEMYRKIGKGEFKFPKWFAPEVRRLLSKILDPSLKTRISMAKIMENSWFKKGLEKPVVIETENSELTSLHAEGVFEVSENGGDSNTETKQQAKPCNNLNAFDIISFSSGFDLSSLFEDRIQKKEMRFTSNKPASTIISKLEEICKCLQLKVKKKDGGLLKLEGSKEGRKGILNIDAEIFEITPHFHLVELKKSDGDTVEYEKLMQQEIRPALKDIVWNWQGEQPQKLQQEVVQKEQQTSITAQI 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01939 461 ProSiteProfiles NAF domain profile. 310 334 IPR018451 GO:0007165
Mepo3g01939 461 CDD STKc_SnRK3 11 265 - -
Mepo3g01939 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Mepo3g01939 461 Gene3D Kinase associated domain 1, KA1 310 435 - -
Mepo3g01939 461 Pfam NAF domain 313 370 IPR004041 GO:0007165
Mepo3g01939 461 FunFam Non-specific serine/threonine protein kinase 2 301 - -
Mepo3g01939 461 Gene3D Transferase(Phosphotransferase) domain 1 92 272 - -
Mepo3g01939 461 CDD CIPK_C 316 430 - -
Mepo3g01939 461 SUPERFAMILY Protein kinase-like (PK-like) 8 280 IPR011009 -
Mepo3g01939 461 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Mepo3g01939 461 FunFam Non-specific serine/threonine protein kinase 310 434 - -
Mepo3g01939 461 Gene3D Phosphorylase Kinase; domain 1 3 91 - -
Mepo3g01939 461 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01939 461 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Mepo3g01939 461 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g01939 461 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 431 - -
Mepo3g01939 461 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01939 Mepo-Chr3 28518988 28520373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01939 1 442 CBL-interacting serine-threonine protein kinases AT5G58380 66.009 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mepo3g01939 Pkinase 1.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01939 K07198 - gmx:100803787 677.937