Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01932 ATGGACTCAAAGGATCGAAGAAGAGTGGCTCTCCAACAACTTCGAGATGTCACAAACTCAACTGCTATGAAGAAAGCCTCAATTATTGTGGACGCCTCCAAATACATAGAAGAGTTGAAGCAAAAAGTGGAGAGAATGAACTCTGAGTTAGGAAACGTTGAGTCCTCAACTCCTCAAATGGATGAGCAACCTATGGTGAGTGTGAAAACCCTAGAAAAGGGTTTCCTGATTAATGTGCTTTTGGAAAAGAATAGCCCTGGTATGTTGGTGTCAATACTGGAAGCTTTTGAAGATCTGGGACTTGATGTACTTGATGCTAGGGTTTCTTGTGAAGACACTTTCCAGCTAGAAGCTGTGGGAGGAGATACTCATAAGGACGATAGTATCAATGCGCAAGTGGTGAAGCAAGCAGTGTTGCAAGCAATCAAGAACACGGACTAA 441 0.4286 MDSKDRRRVALQQLRDVTNSTAMKKASIIVDASKYIEELKQKVERMNSELGNVESSTPQMDEQPMVSVKTLEKGFLINVLLEKNSPGMLVSILEAFEDLGLDVLDARVSCEDTFQLEAVGGDTHKDDSINAQVVKQAVLQAIKNTD 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01932 146 ProSiteProfiles ACT domain profile. 77 146 IPR002912 -
Mepo3g01932 146 Coils Coil 29 56 - -
Mepo3g01932 146 CDD ACT_UUR-ACR-like 83 142 - -
Mepo3g01932 146 Coils Coil 145 146 - -
Mepo3g01932 146 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 10 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01932 Mepo-Chr3 28436289 28439348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01932 1 105 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 26.471 7.59e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01932 - - mtr:11442077 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01932 3 28436289 28439348 Mepo3g01932 3 28436289 28439348 ECH
Mepo3g01932 3 28436289 28439348 Mepo7g02348 7 34326198 34328566 ECH
Mepo3g05160 3 64603108 64604346 Mepo3g01932 3 28436289 28439348 ECH
Mepo3g01932 3 28436289 28439348 Mepo3g05160 3 64603108 64604346 ECH