Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01905 ATGACTATGGATGATCATCAATATCATAACTGGGAAACTTCTGAACTTAATACTAATAATAATCATAATCATAATCATAATCATAATAATCAAGTTGGTCCAATTAATGATGCACCTAAATTCAAATCTGTTCAACCACCTTCATTACCTCTTTCATCTTCACCTTCTTTTCACTTACCATTTTCATCTACTTTTAGTCCAACTGATTTCTTGATCTCACCTTTCTTTCTTTCTTCTCCAAATGTTTTTGCTTCTCCAACTACTGAGGCTTTTGCTAACCAAAGCTTTAACTGGAACAAGAACAGTTTAGGTGAAGAAGAGCAACAAGGTGATAAGAAGGATGAGAAGAATTTCTCTGATTTCTCTTTTCCAACTCAAACTAAGCCTGAATCTGTTTTTCAATCTTCCACAAACATGTTTCAACAGGAACAAACTAAGAAACAAGACATATGGAAATTCAATGAACCTACAAAGCAACCAGATTTTTCATCCGAGAGGACGGCATCAAAATCTGAATTCCAATCAACTCAGAGCTATTCCTCAGAAATTGTACCAATCAAACCAGAAATGCATAGTAATTCAGTTGGATCTGGTTATTATAACTATAATAATAATCCATCTCAACCTGTTAGAGAACAAAGGAGATCAGAAGATGGTTACAATTGGAGAAAATATGGACAGAAACAAGTGAAAGGAAGCGAAAATCCGCGTAGCTATTACAAGTGCACGGATCCAAATTGCTCAATGAAGAAGAAAGTCGAGAGGGATTTGGACGGACAAATTACTGAAATTGTATATAAGGGAACTCATAACCACCCTAAGCCTCAGTCTAATAGAAGAACAAACTCTCAGCCTACTTCATCATGCACTAACTCCGGAATTTCTGATCAATCAGCGATGGATCATGTCTCCATACAAGAAGATTCTTCAGCTTCTGTGGGAGAGGAAGAATTTGAACAAACATCACAAACTAGTTATTCTGGAGGAAATGACAACGCCCTTGTACCAGAGGCGAAAAGATGGAAGGGTGATAATGAAAATGAGGGCTATTGTGCCTCAGCTAGTAGAACTGTTAAAGAACCTAGAGTTGTAGTTCAAACTACAAGTGAAATTGATATCCTTGATGATGGCTTTAGGTGGAGGAAATATGGTCAGAAAGTTGTTAAAGGAAATCCTAATGCAAGGAGCTATTACAAATGCACTGCCCCTAACTGTTCAGTGAGAAAACACGTTGAAAGAGCTGCACATGATATCAAAGCCGTGATCACAACTTATGAAGGGAAACACAACCATGATGTACCAGCTGCACGTGGCTCTGCAGGTTACAACCTGAACAGAAATTCTCTGAACAACAGCAACATACCAGCGCCTATTAGGCCCTCAGCAGTGAACTGTTATTCCAATTCAGCAAGTTTCACGAATTCACTTTATAATAATACCGGACTTCCTGCCAACGGAAATCAGGAGGCATTTCCACAGGACATGTTACAGGGTCATGGAAATTTCGGGTATTCATCTCTCGGAAGATCAATGGATTCATCGGCCAATCATTCACAATACTCAGATGCTGCATACTTAAAGGCCAAGGATGAGAGGAAGGATGACTCGTTCCTTCAGTCCTTTCTGTCAAACGACTTCTAA 1641 0.3863 MTMDDHQYHNWETSELNTNNNHNHNHNHNNQVGPINDAPKFKSVQPPSLPLSSSPSFHLPFSSTFSPTDFLISPFFLSSPNVFASPTTEAFANQSFNWNKNSLGEEEQQGDKKDEKNFSDFSFPTQTKPESVFQSSTNMFQQEQTKKQDIWKFNEPTKQPDFSSERTASKSEFQSTQSYSSEIVPIKPEMHSNSVGSGYYNYNNNPSQPVREQRRSEDGYNWRKYGQKQVKGSENPRSYYKCTDPNCSMKKKVERDLDGQITEIVYKGTHNHPKPQSNRRTNSQPTSSCTNSGISDQSAMDHVSIQEDSSASVGEEEFEQTSQTSYSGGNDNALVPEAKRWKGDNENEGYCASASRTVKEPRVVVQTTSEIDILDDGFRWRKYGQKVVKGNPNARSYYKCTAPNCSVRKHVERAAHDIKAVITTYEGKHNHDVPAARGSAGYNLNRNSLNNSNIPAPIRPSAVNCYSNSASFTNSLYNNTGLPANGNQEAFPQDMLQGHGNFGYSSLGRSMDSSANHSQYSDAAYLKAKDERKDDSFLQSFLSNDF 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01905 546 Gene3D WRKY domain 361 427 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g01905 546 MobiDBLite consensus disorder prediction 194 210 - -
Mepo3g01905 546 ProSiteProfiles WRKY domain profile. 211 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g01905 546 MobiDBLite consensus disorder prediction 105 119 - -
Mepo3g01905 546 SUPERFAMILY WRKY DNA-binding domain 212 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g01905 546 ProSiteProfiles WRKY domain profile. 369 434 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g01905 546 MobiDBLite consensus disorder prediction 103 238 - -
Mepo3g01905 546 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 131 456 IPR044810 GO:0003700
Mepo3g01905 546 SMART WRKY_cls 374 433 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g01905 546 SMART WRKY_cls 216 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g01905 546 MobiDBLite consensus disorder prediction 157 183 - -
Mepo3g01905 546 MobiDBLite consensus disorder prediction 1 53 - -
Mepo3g01905 546 SUPERFAMILY WRKY DNA-binding domain 366 434 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g01905 546 MobiDBLite consensus disorder prediction 12 36 - -
Mepo3g01905 546 MobiDBLite consensus disorder prediction 271 331 - -
Mepo3g01905 546 MobiDBLite consensus disorder prediction 120 147 - -
Mepo3g01905 546 MobiDBLite consensus disorder prediction 267 347 - -
Mepo3g01905 546 FunFam WRKY transcription factor 205 276 - -
Mepo3g01905 546 FunFam WRKY transcription factor 33 361 427 - -
Mepo3g01905 546 Gene3D WRKY domain 204 276 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g01905 546 Pfam WRKY DNA -binding domain 217 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g01905 546 Pfam WRKY DNA -binding domain 375 431 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01905 Mepo-Chr3 27930645 27933339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01905 211 542 WRKY Transcription Factor Family AT2G38470 53.672 2.74e-108 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo3g01905 WRKY 1.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01905 K13424 - gmx:100776837 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01905 3 27930645 27933339 Mepo3g01905 3 27930645 27933339 ECH
Mepo3g01905 3 27930645 27933339 Mepo2g00339 2 3727268 3730602 PCT