Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01896 ATGGGTGGCTGTTGCAGCCACGACGTTGCTCTTAGAGGAGGAGGCAGAGTGGAAACCGAGGTGAATGATGGAGAATATGAATATGATGATAGTGAAGATAATAATATTAATAATAATGATGCTGTCATGTATCAAAATGATGGAGCTATGGTTAGATTAAGAGGTTTTTCTAAGCTTGTTTCAATGTATACACAACAGGGTATGAAAGGTGTTAACCAAGATTCAATGACTGTTTGGGAGGACTATTGTGGAGAAGAAGGCATGGTCTTCTGCGGCGTGTTTGACGGTCATGGTCCTCTAGGCCACAAAGTTTCGCAATTTATTCGCGACAATCTACCCTCGAAACTATCTGCAGCTATCAAAATGGCACAACAGAAGGCCAACAAATACTATGATGCTAATGATGCAGATACCGACAATTTTGATGATGTCCAACACAATAATAACCGCATCAACAACATATCCCTTGCTTCATGGGAAGGATGTTTTCTGAAATCCTTTGACGAAATGGATGATCATCTTGCTCGGGAAGTTAACACTGATAGCTATTGCAGTGGTTGCACAGCTGTAGCTTTAATTAAACAGGGTGACCAGTTGATAGTTGGAAATTTGGGCGATTCTCGTGCAGTTCTTTGCACAAGGGATAGAGATCAACTTATTGCTGTTCAACTTACTGTTGACTTGAAACCGGATATTCCAAGTGAAGCTTCGAGAATCTTTAGCTGTGAAGGAAGGGTTTTCGCTGCAGACGAAGAACCGGATGTGTACAGAATATGGATGCCTGATGATGACTGTCCTGGATTAGCTATGTCAAGAGCCTTTGGAGACTTTTGTCTAAAAGATTATGGCCTCATTGCATCTCCAGATGTGTTTTATAGAAAAATTACCAAGCAAGATGAATTTGTTGTTTTGGCAACTGATGGGATATGGGATGTGCTGACAAACAATGAAGTAATAAACATAGTTGCTTCAGCGCCAAGAAAGTCAATAGCAGCGAAGGTGTTAGTAAAGCGCGCTGTTAAAGCCTGGATGTATAAGTATCCTGGATCGAAAATAGACGATTGTGCAGCCGTATGCTTGTTTCTTGATGATCAACCTATTTTATCACATTCTCAATCAAGTTTCAAGCACTCTAAAAGTCGACATCGTCGCAGTAAGCACTCTAAATCCCATCGAAATGAAGACAATGAAACTGTTGCTGGAAAAGTTGGAATGGAACTGGATGAAGAATGGAAAGCTCTTGAAGGGTTAGCTAGGGCAAATTCAATATCAAAACTTCCAAGGCTTGCTAAAAATATGAGTAAAAGACAATCATCTAAGCACCTTAATGGAAGTTGA 1338 0.4036 MGGCCSHDVALRGGGRVETEVNDGEYEYDDSEDNNINNNDAVMYQNDGAMVRLRGFSKLVSMYTQQGMKGVNQDSMTVWEDYCGEEGMVFCGVFDGHGPLGHKVSQFIRDNLPSKLSAAIKMAQQKANKYYDANDADTDNFDDVQHNNNRINNISLASWEGCFLKSFDEMDDHLAREVNTDSYCSGCTAVALIKQGDQLIVGNLGDSRAVLCTRDRDQLIAVQLTVDLKPDIPSEASRIFSCEGRVFAADEEPDVYRIWMPDDDCPGLAMSRAFGDFCLKDYGLIASPDVFYRKITKQDEFVVLATDGIWDVLTNNEVINIVASAPRKSIAAKVLVKRAVKAWMYKYPGSKIDDCAAVCLFLDDQPILSHSQSSFKHSKSRHRRSKHSKSHRNEDNETVAGKVGMELDEEWKALEGLARANSISKLPRLAKNMSKRQSSKHLNGS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01896 445 CDD PP2Cc 60 362 IPR001932 -
Mepo3g01896 445 MobiDBLite consensus disorder prediction 375 389 - -
Mepo3g01896 445 Gene3D - 55 364 IPR036457 -
Mepo3g01896 445 MobiDBLite consensus disorder prediction 372 401 - -
Mepo3g01896 445 MobiDBLite consensus disorder prediction 425 445 - -
Mepo3g01896 445 SUPERFAMILY PP2C-like 52 364 IPR036457 -
Mepo3g01896 445 MobiDBLite consensus disorder prediction 427 445 - -
Mepo3g01896 445 PANTHER PROTEIN PHOSPHATASE 58 360 IPR015655 GO:0004722|GO:0006470
Mepo3g01896 445 SMART PP2C_4 50 360 IPR001932 -
Mepo3g01896 445 Pfam Protein phosphatase 2C 126 340 IPR001932 -
Mepo3g01896 445 ProSiteProfiles PPM-type phosphatase domain profile. 59 362 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01896 Mepo-Chr3 27704009 27706930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01896 1 366 PP2C-type Phosphatase Gene Family AT5G01700 50.543 6.34e-131 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01896 - - mtr:11405988 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01896 3 27704009 27706930 Mepo3g01896 3 27704009 27706930 ECH
Mepo3g01896 3 27704009 27706930 Mepo2g00344 2 3769476 3772179 PCT