Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01883 ATGAAGATTGATACCGTTTCTGGACAAAGGAAATCACGCAAGAGACGCAGTGGTGGAAGAACTGATTCAGTAGAAGACACTCTTGAGAAGTGGAAGAACTACAACAGACAGCAACAACAAAAACTTGGTTGTGGAGATAATGGAGCTGAAAAGATTCACAAAGTTCCTGCAAAAGGTTCAAGAAAAGGGTGCATGAGAGGTAAAGGTGGTCCTCAGAATTCCGATTGCAATTTCAGAGGAGTTAGACAGAGAATTTGGGGTAAATGGGTTGCTGAGATTCGTGAACCAATCAATGGTAAACATGTTGGTGAGAAAGCAAATAGGCTTTGGCTTGGTACTTTTACTACAGCACATGATGCTGCTCTTGCTTATGATAAAGCAGCTAAGGCTATGTATGGACCTAGTGCTCGCTTGAACTTCCCTGATGGATCACCATCATCATCAAGCGGTGGTTCTGCAGATTCTTTGAATGACGAGGATGATCTTGGAAAATCTGAAGAGTTTCATCAGTTTGATGAAGATAATAAGATTCTTTCTAAAGATTTTGTTGCTGATGATGACTCGGTAGAGGAATCGAAGGAAATGTTGATAGCCGGCACTGTCCAATGCCCAACAAATAAGAAATGTAAGAAAGTGGTTCATCAAAAATCTTACAAGAATGTGAAATCTGAAACACATGGAGAAAATAAACGATTAGAGAGAGAATTGGAGGTGGTTTTGGAGAATTCTAGCCTGGATGGAAAGTTTAATCATGTGCAGAAGGAGCCTATGGATGCAGGCATGAACTCAGGAGCTGATCGTAGATCTTCTGATATAGCAGATCTGGTGCAGAGTGAAGAAACAGTAAGAGGATCACCGGAGGATTTGAAATCCTTTGAGTTGAGCTGCAACAATCATTTCATTGGAAATCTGCACAATATGATTCCAGATAGCATTCCAGGACCAAATTCAGAGCATCATAACATCAAAACCGAGGCTTCTCATGCAAAGAAACATAAGAAGGAAGTGGTTGGACATTTCTTAAGCCATGCTCAGTTACAAAATGAGCAAAATAAAAATGGATATTTTGATGAAATGAAAAGTGAGCTTAAGGGATTGGAATACAAGCTGGGTGGCCAATCTATTGATTGCAAGAATGATGAGGCACAAATATTACCTTACATGCAGGGAATTCATCTGTTTGGTGATGACATTGTTGGACCAATTGAAAGAATGTCACAAATTGAGGCTTTGAACAACAATACTAATAAAAACACTAAATTGAAAGAGAAAGGAAATAATGGAAGTGCATTTCATGGACTTAGTTCAGGACAAAGTAGGAAGCTGAGTGATCTTTCTCAACAGTTGCAGAAATTGGGTGGTTACTTGCCTGAAAATTGGAATAATATGCAGTTTGCAGATCTTGAAGTTGGTCATGATTATAGTTTCTTAAAACCTGATTATGATTTTGGTTTATTAGAAGAGAAGAAGTTACTAGATATATGTTTTTCACATATAGGATCTTGA 1506 0.3851 MKIDTVSGQRKSRKRRSGGRTDSVEDTLEKWKNYNRQQQQKLGCGDNGAEKIHKVPAKGSRKGCMRGKGGPQNSDCNFRGVRQRIWGKWVAEIREPINGKHVGEKANRLWLGTFTTAHDAALAYDKAAKAMYGPSARLNFPDGSPSSSSGGSADSLNDEDDLGKSEEFHQFDEDNKILSKDFVADDDSVEESKEMLIAGTVQCPTNKKCKKVVHQKSYKNVKSETHGENKRLERELEVVLENSSLDGKFNHVQKEPMDAGMNSGADRRSSDIADLVQSEETVRGSPEDLKSFELSCNNHFIGNLHNMIPDSIPGPNSEHHNIKTEASHAKKHKKEVVGHFLSHAQLQNEQNKNGYFDEMKSELKGLEYKLGGQSIDCKNDEAQILPYMQGIHLFGDDIVGPIERMSQIEALNNNTNKNTKLKEKGNNGSAFHGLSSGQSRKLSDLSQQLQKLGGYLPENWNNMQFADLEVGHDYSFLKPDYDFGLLEEKKLLDICFSHIGS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01883 501 CDD AP2 76 140 IPR001471 GO:0003700|GO:0006355
Mepo3g01883 501 MobiDBLite consensus disorder prediction 139 161 - -
Mepo3g01883 501 SUPERFAMILY DNA-binding domain 77 142 IPR016177 GO:0003677
Mepo3g01883 501 SMART rav1_2 77 147 IPR001471 GO:0003700|GO:0006355
Mepo3g01883 501 MobiDBLite consensus disorder prediction 140 155 - -
Mepo3g01883 501 Coils Coil 222 242 - -
Mepo3g01883 501 PRINTS Ethylene responsive element binding protein signature 78 89 IPR001471 GO:0003700|GO:0006355
Mepo3g01883 501 PRINTS Ethylene responsive element binding protein signature 107 123 IPR001471 GO:0003700|GO:0006355
Mepo3g01883 501 MobiDBLite consensus disorder prediction 18 32 - -
Mepo3g01883 501 FunFam Ethylene-responsive transcription factor 2 76 142 - -
Mepo3g01883 501 Gene3D AP2/ERF domain 77 142 IPR036955 GO:0003700|GO:0006355
Mepo3g01883 501 Pfam AP2 domain 76 133 IPR001471 GO:0003700|GO:0006355
Mepo3g01883 501 MobiDBLite consensus disorder prediction 1 77 - -
Mepo3g01883 501 ProSiteProfiles AP2/ERF domain profile. 77 141 IPR001471 GO:0003700|GO:0006355
Mepo3g01883 501 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 9 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01883 Mepo-Chr3 27504426 27507242 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01883 1 167 AP2-EREBP Transcription Factor Family AT2G40340 50.282 4.21e-44 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo3g01883 AP2 8.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01883 - - tpra:123891882 771.926