LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g01880	ATGCAAATTACTCTTTTCTCCTTCTTCATCCTCCTTTTCTTTTTTCATCCCGTCGTTTCTCTCTCCTCCGACGGCCTCGCTCTTCTAACACTCAAATCCGCCGTAGACGGCGGCGACACAGCAACCACATTCTCCGACTGGAACGAAAACGACCTGACCCCCTGTCACTGGTCCGGCATTAGCTGCTCCAACATCTCCGGCGAACCTGACTCCCGTGTCGTCGGTATCGGCCTCGCCGGAAAAGGCCTCCGTGGTTATCTCCCGTCGGAGCTCGGAAACCTTATCTATCTCCGTCGTCTTAGCCTCCATACTAACCTCTTCCATGGCTCCATTCCTGTTCAGCTCTTCAATGCTACTTCACTTCACAGCATCTTTCTGCATAGTAACAATCTCTCCGGTAGCCTCTCTCCGTCGGTGTGTAACCTTCCACGTCTTCAAAACCTTGACCTCTCTGATAATTCACTCGCCGGAGATATTCCTGAGTCAGTCGGAAACTGTTCACAGCTACAGAGACTGATTCTCGCGAGGAATAATTTCTCCGGTGACATTCCGGTGACGCCGTGGAAGAAGCTGAAGAATCTCGTTCAGCTAGATTTATCAGCAAATGTTCTAGAAGGTTCAATTCCGGAACAAATTGGTGACTTAAACTCACTCACCGGAACGCTAAACCTTTCGTTTAATCATTTATCCGGTAAAGTTCCGAAGTCTCTAGGAAAATTGCCGGTGACGGTTAGTTTTGATCTTCGGAGTAATGATCTGAGCGGTGAAATTCCTCAAACCGGGTCATTTTCAAATCAAGGACCTACAGCGTTTCTGAACAATCCGAAACTATGTGGGTTTCCTCTGCAGAAAGATTGTACCAGTTCAGCGTCGAGTGAACCTGGAGCTAGTCCTGGTTCAGCTCGACAACGCGTGAACCGGTCTAAGAAAGGGTTAAGTCCTGGTTTGATTATTATTATAACAGTGGCTGATGCTGCTGCTGTAGCATTGATTGGTCTTGTAGTTGTGTATGTGTATTGGAAAAAGAAGGATAAGAATAATGGGTGTAGTTGTACTTTGAAGAGAAAATTTGGTGGTAATGGAAACAACGAAAGATCGAATTCGTGTTGTTTGTGTTGGACTTTAGGTTGTGTAAAAGGGTTTAAGAGTGATGATTCAGAGATGGAAGAGAGTGAGAAAGGAGGAAGAGAGGGTAATGGGAGAGGAGAAGGTGAAGGGGAAGGTGAATTAGTGGCAATTGATAAAGGTTTTAGCTTTGAACTTGATGAATTGTTAAGAGCTTCTGCATATGTGTTAGGGAAAAGTGGGTTAGGGATTGTGTATAAGGTTGTGCTTGGGAATGGTGTACCTGTGGCTGTGAGGAGATTAGGGGAAGGTGGTGAACAAAGGTATAAGGAGTTTGCTACTGAAGTTCAAGCAATTGGGAAAGTGAAACATCCTAATATTGTTAAGTTAAGAGCTTATTATTGGGCTCATGATGAAAAGCTTTTGATTAGTGATTTTGTTTCTAATGGCAATTTGGCTAATGCTCTTAGAGGGAGAAATGGCCAACCATCTCCAAATCTTTCATGGTCAATCAGGCTGAGAATAGCCAAAGGAACAGCCAGAGGTTTAGCCTATCTCCATGAATGCAGTCCAAGAAAATTTGTTCATGGTGACCTCAAACCGTCCAATATCCTCCTTGACACAGACTTCCAACCCCTCATTTCCGACTTCGGTCTTAACAGGCTAATAAGCATCACCGGCAACAATCCTTCCACCGGTGGTTTTATGGGTGGAGCTCTTCCTTACATGAAGTCATCGCAAACAGAACGAACCAACAACTATAAAGCTCCTGAAGCTAAAGTACCAGGCTGCAGACCCACCCAAAAATGGGATGTGTATTCATTTGGTGTTGTATTACTTGAGTTGCTCACCGGTAAGTCCCCGGATTCTTCTCCAGGAGCATCGACTTCTGTCGAAGTACCTGATTTGGTAAGGTGGGTAAAGAAAGGGTTTGAACAAGAAAGTCCTTTATCTGAAATGGTTGATCCATCACTTCTTCAAGAAATTCATGCCAAGAAAGAAGTACTAGCTGTGTTTCATGTAGCACTATCATGTACTGAGGGAGACCCTGAAGTCAGGCCTAGAATGAAAACTGTGTCTGACAATCTTGAAAGAATTTGA	2166	0.4455	MQITLFSFFILLFFFHPVVSLSSDGLALLTLKSAVDGGDTATTFSDWNENDLTPCHWSGISCSNISGEPDSRVVGIGLAGKGLRGYLPSELGNLIYLRRLSLHTNLFHGSIPVQLFNATSLHSIFLHSNNLSGSLSPSVCNLPRLQNLDLSDNSLAGDIPESVGNCSQLQRLILARNNFSGDIPVTPWKKLKNLVQLDLSANVLEGSIPEQIGDLNSLTGTLNLSFNHLSGKVPKSLGKLPVTVSFDLRSNDLSGEIPQTGSFSNQGPTAFLNNPKLCGFPLQKDCTSSASSEPGASPGSARQRVNRSKKGLSPGLIIIITVADAAAVALIGLVVVYVYWKKKDKNNGCSCTLKRKFGGNGNNERSNSCCLCWTLGCVKGFKSDDSEMEESEKGGREGNGRGEGEGEGELVAIDKGFSFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFATEVQAIGKVKHPNIVKLRAYYWAHDEKLLISDFVSNGNLANALRGRNGQPSPNLSWSIRLRIAKGTARGLAYLHECSPRKFVHGDLKPSNILLDTDFQPLISDFGLNRLISITGNNPSTGGFMGGALPYMKSSQTERTNNYKAPEAKVPGCRPTQKWDVYSFGVVLLELLTGKSPDSSPGASTSVEVPDLVRWVKKGFEQESPLSEMVDPSLLQEIHAKKEVLAVFHVALSCTEGDPEVRPRMKTVSDNLERI	721

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g01880	721	Pfam	Protein kinase domain	431	646	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g01880	721	ProSiteProfiles	Protein kinase domain profile.	426	721	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g01880	721	Gene3D	Ribonuclease Inhibitor	23	186	IPR032675	-
	Mepo3g01880	721	SUPERFAMILY	L domain-like	23	283	-	-
	Mepo3g01880	721	Gene3D	Phosphorylase Kinase; domain 1	409	501	-	-
	Mepo3g01880	721	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	167	721	IPR046959	-
	Mepo3g01880	721	Gene3D	Ribonuclease Inhibitor	187	288	IPR032675	-
	Mepo3g01880	721	CDD	STKc_IRAK	432	721	-	-
	Mepo3g01880	721	MobiDBLite	consensus disorder prediction	387	406	-	-
	Mepo3g01880	721	FunFam	Leucine-rich repeat receptor-like protein kinase	409	501	-	-
	Mepo3g01880	721	SMART	serkin_6	430	721	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g01880	721	FunFam	Os07g0541700 protein	509	592	-	-
	Mepo3g01880	721	Pfam	Leucine rich repeat N-terminal domain	22	63	IPR013210	-
	Mepo3g01880	721	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	549	561	IPR008271	GO:0004672\|GO:0006468
	Mepo3g01880	721	FunFam	Leucine-rich repeat receptor-like protein kinase	21	185	-	-
	Mepo3g01880	721	FunFam	Leucine-rich repeat receptor-like protein kinase	193	288	-	-
	Mepo3g01880	721	Gene3D	Transferase(Phosphotransferase) domain 1	502	721	-	-
	Mepo3g01880	721	SUPERFAMILY	Protein kinase-like (PK-like)	431	718	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g01880	Mepo-Chr3	27491596	27496392	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo3g01880	17	721	Receptor kinase-like Gene Family	AT1G67510	69.861	0.0	987

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Mepo3g01880		Pkinase	1.1e-32	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g01880	-		-	gmx:100795021	1105.51