Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01857 ATGAATATGAGGGAGGAAGAAGCATATGGATCAGAATGTTCCAAGGCAAGTGTTTCAATTAATGAAGATGATTGTGAAATTAGTGAAGGAAATGAAGATGAGGAAAGTAATAAGAAAATCAACAACAATGGAGGAATAAGCTCAAGCAATAGTACTATAGAAGAGAATTGTGAGAAGAAATCATCAGTGAGGCCTTATGTTAGATCCAAGTTTCCTAGGCTACGCTGGACTCCTGATCTTCATTTTCGTTTTCTTCATGCTGTACAGAGACTTGGTGGACAAGAGAGAGCAACTCCAAAATTGGTTCTTCAATTGATGAATATAAAAGGTTTAAGTATTGCTCATGTGAAGAGTCATTTACAGATGTATAGAAGCAAGAAAGTAGTTGACACAAATCAAGTGTTGGCTGATCATAGGCTTCTTGTAGACAATGGAGACAAAAATGTTTATAATCTCACCCAACTTCCCATGCTTCAAGGCTATACTCCAAATCAAACATCATCATATAGATGTGGATCATATGGGGATGCCTCTCTTGCTATGTATGAAAATATGGTTCAAATGAGTTCAATAAGTGAATCTAGAGCTGACTTCTATGGCAAAATGATTGAGAGAACCAATAATAACAACATTAATATGCAAGGTCATAGTATTTTCCAAATGGATTCATCCAATTTTAGAGATCTATCAACAACTAAAGTCCGTGAACCAAATGATAATTTCCTCTCATTTTGTGGCCATGAATCTTTAAGAGATGATCTACAAGTTCAAGCAAGAGCACAAGATCTCATTTCGAACGATAACTTGCCTGCAAATCAAGTGGAAGAATTGAAGACAATGAAAAGAAAAGCTTCAGATATGGATCTTGAGTTGGATCTATCACTTAAATTAAATTCAAGGAGCAATGGTGATCATAAATGTATAGAGGAAAATGAAATTGACAGCAATTTATCACTCTCATTGTATTCTCAATCATCTTATGTTTGCAAAAGGATGAAAGAAGAACAAGATGGTTCTAAGGAGCAAGAGAAAGGAGTCAATATTTCTTTGGATCTAACCATATGA 1065 0.3502 MNMREEEAYGSECSKASVSINEDDCEISEGNEDEESNKKINNNGGISSSNSTIEENCEKKSSVRPYVRSKFPRLRWTPDLHFRFLHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVVDTNQVLADHRLLVDNGDKNVYNLTQLPMLQGYTPNQTSSYRCGSYGDASLAMYENMVQMSSISESRADFYGKMIERTNNNNINMQGHSIFQMDSSNFRDLSTTKVREPNDNFLSFCGHESLRDDLQVQARAQDLISNDNLPANQVEELKTMKRKASDMDLELDLSLKLNSRSNGDHKCIEENEIDSNLSLSLYSQSSYVCKRMKEEQDGSKEQEKGVNISLDLTI 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01857 354 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 51 223 IPR046955 GO:0003700
Mepo3g01857 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 128 IPR017930 -
Mepo3g01857 354 SUPERFAMILY Homeodomain-like 72 126 IPR009057 -
Mepo3g01857 354 Pfam Myb-like DNA-binding domain 74 124 IPR001005 -
Mepo3g01857 354 MobiDBLite consensus disorder prediction 1 59 - -
Mepo3g01857 354 NCBIfam myb-like DNA-binding domain, SHAQKYF class 72 127 IPR006447 GO:0003677
Mepo3g01857 354 MobiDBLite consensus disorder prediction 334 354 - -
Mepo3g01857 354 MobiDBLite consensus disorder prediction 40 56 - -
Mepo3g01857 354 FunFam Myb family transcription factor 70 128 - -
Mepo3g01857 354 Gene3D - 72 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01857 Mepo-Chr3 27223988 27225984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01857 63 128 G2-like Transcription Factor Family AT2G42660 78.788 4.79e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo3g01857 Myb_DNA-binding 3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01857 - - cam:101498576 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01857 3 27223988 27225984 Mepo3g01857 3 27223988 27225984 ECH