Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01856 ATGGCAGCAGCATCACCAGCATACCAAGAACATCTTCCAACATCACCAGCATGGCTAAACAAAGGAGACAACGCATGGCAAATGACAGCAGCAACACTTGTTGGTCTTCAAAGCATGCCAGGACTAGTAATTCTCTATGCAAGCATAGTGAAAAAGAAATGGGCAGTGAATTCAGCTTTCATGGCACTATATGCTTTTGCAGCAGTTTTAATCTGTTGGGTTCTTGTTGCTTATAGAATGGCTTTTGGTGATGAACTTTTACCTTTCTGGGGTAAAGGTGCACCGGCTTTAGGACAAAAATTTCTTGTTGCTAGAGCGAAAGTACCTGCAAGTACTCACTATTACAAGAATGGTGTTGATATTGAAACACCTATGGAAGAACCTTTTTTTCCTATGGCTTCACTTGTTTATTTTCAGTTTACTTTTGCTGCTATTACTATGATTTTGTTGGCTGGTTCTGTTCTTGGAAGAATGAATATTAAAGCTTGGATGGCTTTTGTTCCTCTTTGGCTTATTTTTTCTTATACTGTTGGTGCTTTTAGTCTTTGGGGGGGTGGATTTCTTTACCATTGGGGTGTGATTGATTATTCTGGTGGCTATGTTATTCATCTTTCTTCTGGAATTGCTGGTTTCACTGCTGCTTATTGGGTTGGACCAAGGATAAAGAGTGATAGGGAAAGGTTTCCACCAAACAATGTGTTGCTGATGCTTGCAGGTGCTGGATTGTTATGGATGGGTTGGTCAGGGTTCAATGGTGGAGCACCATATGCAGCAAATGTTGCATCTTCAATTGCTGTGTTGAACACAAACATTTGTGCAGCAACTAGTCTTCTTGTGTGGACCTCTCTTGATGTTGTGTTCTTTGGGAAGCCTTCTGTTATTGGAGCTGTTCAGGGTATGATGACTGGACTTGTATGCATCACACCAGGAGCAGGGCTTGTGCAATCGTGGGCGGCTATTGTGATGGGAATTCTATCTGGGAGCATTCCTTGGGTCTCAATGATGATCTTGCATAAAAAGTCAAGTCTTCTACAAAAGGTTGATGACACTCTTGGAGTATTTCACACACATGCTGTGGCTGGCCTATTGGGTGGCCTACTAACAGGACTCTTTGCAGAGCCAGCCTTATGTAGATTACTATTACCAGTGACAAATTCAAGGGGTGCATTCTATGGTGGAAGTGGTGGTATGCAATTCCTAAAACAATTAGTGGCAGCAATGTTTGTTATTGGATGGAACATAGTCTCCACCACAATCATTCTCCTTGTTATACAACTATTCATACCCTTGAGGATGCCCGACGAGCAGCTCGAAATTGGGGACGATGCGGCTCACGGTGAGGAAGCTTATGCTCTTTGGGGTGATGGAGAAAAATATGATCCAACTAGGCATGGTTCGTTGAATACTGGTAACACTGGAGTATCACCTTATGTTAATGGTGCAAGAGGTGTGACTATAAATTTATGA 1467 0.4233 MAAASPAYQEHLPTSPAWLNKGDNAWQMTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLVAYRMAFGDELLPFWGKGAPALGQKFLVARAKVPASTHYYKNGVDIETPMEEPFFPMASLVYFQFTFAAITMILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYHWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRIKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANVASSIAVLNTNICAATSLLVWTSLDVVFFGKPSVIGAVQGMMTGLVCITPGAGLVQSWAAIVMGILSGSIPWVSMMILHKKSSLLQKVDDTLGVFHTHAVAGLLGGLLTGLFAEPALCRLLLPVTNSRGAFYGGSGGMQFLKQLVAAMFVIGWNIVSTTIILLVIQLFIPLRMPDEQLEIGDDAAHGEEAYALWGDGEKYDPTRHGSLNTGNTGVSPYVNGARGVTINL 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01856 488 PRINTS Rhesus blood group protein signature 320 338 IPR002229 GO:0005886
Mepo3g01856 488 PRINTS Rhesus blood group protein signature 265 287 IPR002229 GO:0005886
Mepo3g01856 488 PRINTS Rhesus blood group protein signature 234 252 IPR002229 GO:0005886
Mepo3g01856 488 PRINTS Rhesus blood group protein signature 139 155 IPR002229 GO:0005886
Mepo3g01856 488 Pfam Ammonium Transporter Family 25 450 IPR024041 GO:0008519|GO:0016020|GO:0072488
Mepo3g01856 488 Gene3D Ammonium transporter AmtB like domains 2 453 IPR029020 -
Mepo3g01856 488 SUPERFAMILY Ammonium transporter 18 432 - -
Mepo3g01856 488 NCBIfam ammonium transporter 23 450 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mepo3g01856 488 PANTHER AMMONIUM TRANSPORTER MEP2 10 460 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mepo3g01856 488 FunFam Ammonium transporter 7 453 - -
Mepo3g01856 488 ProSitePatterns Ammonium transporters signature. 195 220 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01856 Mepo-Chr3 27208020 27213339 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01856 132 488 Inorganic Solute Cotransporters AT2G38290 78.273 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01856 K03320 - gmx:100783281 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01856 3 27208020 27213339 Mepo3g01856 3 27208020 27213339 ECH